Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm22238-201ENSMUST00000175222 88 ntBASIC17.65■□□□□ 0.42
Lsm6P62313 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.65■□□□□ 0.42
Lsm6P62313 Gm43530-201ENSMUST00000195920 274 ntBASIC17.65■□□□□ 0.42
Lsm6P62313 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.65■□□□□ 0.42
Lsm6P62313 Rps24-207ENSMUST00000224568 714 ntBASIC17.65■□□□□ 0.42
Lsm6P62313 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm6P62313 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm6P62313 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.65■□□□□ 0.42
Lsm6P62313 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.65■□□□□ 0.42
Lsm6P62313 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm6P62313 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm6P62313 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Lsm6P62313 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm6P62313 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm6P62313 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm6P62313 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Lsm6P62313 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Lsm6P62313 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm6P62313 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm6P62313 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm6P62313 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm6P62313 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm6P62313 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Lsm6P62313 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm6P62313 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm6P62313 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm6P62313 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.63■□□□□ 0.41
Lsm6P62313 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.63■□□□□ 0.41
Lsm6P62313 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm6P62313 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm6P62313 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm6P62313 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm6P62313 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm6P62313 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm6P62313 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm6P62313 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.62■□□□□ 0.41
Lsm6P62313 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.62■□□□□ 0.41
Lsm6P62313 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm6P62313 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm6P62313 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm6P62313 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lsm6P62313 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.62■□□□□ 0.41
Lsm6P62313 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm6P62313 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm6P62313 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm6P62313 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm6P62313 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.61■□□□□ 0.41
Lsm6P62313 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.61■□□□□ 0.41
Lsm6P62313 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm6P62313 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm6P62313 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Lsm6P62313 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm6P62313 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm6P62313 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm6P62313 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Lsm6P62313 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Lsm6P62313 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm6P62313 Gm14117-201ENSMUST00000122417 843 ntBASIC17.6■□□□□ 0.41
Lsm6P62313 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm6P62313 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.6■□□□□ 0.41
Lsm6P62313 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lsm6P62313 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm6P62313 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm6P62313 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm6P62313 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm6P62313 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm6P62313 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm6P62313 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lsm6P62313 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.59■□□□□ 0.41
Lsm6P62313 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm6P62313 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Lsm6P62313 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm6P62313 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm6P62313 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm6P62313 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.58■□□□□ 0.4
Lsm6P62313 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
Lsm6P62313 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm6P62313 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm6P62313 Mir6236-201ENSMUST00000184437 123 ntBASIC17.58■□□□□ 0.4
Lsm6P62313 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.58■□□□□ 0.4
Lsm6P62313 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm6P62313 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm6P62313 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm6P62313 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm6P62313 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm6P62313 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm6P62313 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm6P62313 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm6P62313 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm6P62313 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Lsm6P62313 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm6P62313 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms