Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Lsm3P62311 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lsm3P62311 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.35■□□□□ 0.53
Lsm3P62311 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm3P62311 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm3P62311 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm3P62311 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Lsm3P62311 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lsm3P62311 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm3P62311 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm3P62311 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm3P62311 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Lsm3P62311 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Lsm3P62311 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm3P62311 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm3P62311 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm3P62311 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm3P62311 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm3P62311 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lsm3P62311 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lsm3P62311 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lsm3P62311 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm3P62311 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm3P62311 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.33■□□□□ 0.52
Lsm3P62311 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.33■□□□□ 0.52
Lsm3P62311 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm3P62311 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm3P62311 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm3P62311 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm3P62311 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.33■□□□□ 0.52
Lsm3P62311 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm3P62311 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm3P62311 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm3P62311 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.32■□□□□ 0.52
Lsm3P62311 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm3P62311 Gm6821-201ENSMUST00000107540 542 ntBASIC18.32■□□□□ 0.52
Lsm3P62311 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.32■□□□□ 0.52
Lsm3P62311 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm3P62311 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm3P62311 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm3P62311 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Lsm3P62311 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm3P62311 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.31■□□□□ 0.52
Lsm3P62311 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm3P62311 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm3P62311 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm3P62311 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm3P62311 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm3P62311 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Lsm3P62311 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.31■□□□□ 0.52
Lsm3P62311 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.31■□□□□ 0.52
Lsm3P62311 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm3P62311 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm3P62311 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.31■□□□□ 0.52
Lsm3P62311 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm3P62311 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.3■□□□□ 0.52
Lsm3P62311 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.3■□□□□ 0.52
Lsm3P62311 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Lsm3P62311 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm3P62311 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm3P62311 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm3P62311 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm3P62311 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm3P62311 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm3P62311 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm3P62311 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm3P62311 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm3P62311 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm3P62311 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm3P62311 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Lsm3P62311 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm3P62311 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm3P62311 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm3P62311 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lsm3P62311 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Lsm3P62311 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm3P62311 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
Lsm3P62311 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.28■□□□□ 0.52
Lsm3P62311 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm3P62311 Gm44428-201ENSMUST00000204474 874 ntBASIC18.28■□□□□ 0.52
Lsm3P62311 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm3P62311 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm3P62311 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm3P62311 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Lsm3P62311 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm3P62311 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.27■□□□□ 0.52
Lsm3P62311 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm3P62311 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm3P62311 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lsm3P62311 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Lsm3P62311 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.27■□□□□ 0.51
Lsm3P62311 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Lsm3P62311 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm3P62311 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Lsm3P62311 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm3P62311 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm3P62311 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm3P62311 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm3P62311 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm3P62311 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms