Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.57■□□□□ 0.4
Sec61a1P61620 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.57■□□□□ 0.4
Sec61a1P61620 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a1P61620 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.57■□□□□ 0.4
Sec61a1P61620 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a1P61620 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a1P61620 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a1P61620 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a1P61620 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a1P61620 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a1P61620 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a1P61620 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a1P61620 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a1P61620 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sec61a1P61620 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Sec61a1P61620 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a1P61620 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.56■□□□□ 0.4
Sec61a1P61620 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a1P61620 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a1P61620 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a1P61620 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sec61a1P61620 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a1P61620 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a1P61620 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a1P61620 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.55■□□□□ 0.4
Sec61a1P61620 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a1P61620 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a1P61620 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a1P61620 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a1P61620 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a1P61620 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a1P61620 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a1P61620 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Sec61a1P61620 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a1P61620 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.54■□□□□ 0.4
Sec61a1P61620 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.54■□□□□ 0.4
Sec61a1P61620 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a1P61620 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sec61a1P61620 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec61a1P61620 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Sec61a1P61620 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Sec61a1P61620 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a1P61620 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a1P61620 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a1P61620 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sec61a1P61620 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Sec61a1P61620 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.53■□□□□ 0.4
Sec61a1P61620 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.53■□□□□ 0.4
Sec61a1P61620 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a1P61620 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a1P61620 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a1P61620 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a1P61620 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a1P61620 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec61a1P61620 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.53■□□□□ 0.4
Sec61a1P61620 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sec61a1P61620 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.52■□□□□ 0.4
Sec61a1P61620 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Sec61a1P61620 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Sec61a1P61620 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.52■□□□□ 0.4
Sec61a1P61620 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.52■□□□□ 0.4
Sec61a1P61620 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Sec61a1P61620 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Sec61a1P61620 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sec61a1P61620 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sec61a1P61620 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sec61a1P61620 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sec61a1P61620 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a1P61620 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a1P61620 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sec61a1P61620 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a1P61620 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a1P61620 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a1P61620 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a1P61620 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a1P61620 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a1P61620 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sec61a1P61620 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.51■□□□□ 0.39
Sec61a1P61620 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sec61a1P61620 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a1P61620 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a1P61620 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a1P61620 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a1P61620 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a1P61620 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.5■□□□□ 0.39
Sec61a1P61620 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.5■□□□□ 0.39
Sec61a1P61620 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a1P61620 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a1P61620 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a1P61620 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a1P61620 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Sec61a1P61620 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sec61a1P61620 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sec61a1P61620 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sec61a1P61620 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sec61a1P61620 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.49■□□□□ 0.39
Sec61a1P61620 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.49■□□□□ 0.39
Sec61a1P61620 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sec61a1P61620 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sec61a1P61620 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms