Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SmoP56726 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SmoP56726 Serp2-204ENSMUST00000228055 705 ntBASIC20.31■□□□□ 0.84
SmoP56726 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.3■□□□□ 0.84
SmoP56726 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SmoP56726 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SmoP56726 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SmoP56726 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SmoP56726 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SmoP56726 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SmoP56726 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.3■□□□□ 0.84
SmoP56726 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SmoP56726 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SmoP56726 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SmoP56726 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.3■□□□□ 0.84
SmoP56726 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SmoP56726 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SmoP56726 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SmoP56726 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SmoP56726 Gm8493-201ENSMUST00000196881 489 ntBASIC20.29■□□□□ 0.84
SmoP56726 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.29■□□□□ 0.84
SmoP56726 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SmoP56726 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SmoP56726 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SmoP56726 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SmoP56726 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SmoP56726 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SmoP56726 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SmoP56726 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.28■□□□□ 0.84
SmoP56726 Spcs1-204ENSMUST00000226782 949 ntBASIC20.28■□□□□ 0.84
SmoP56726 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SmoP56726 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
SmoP56726 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SmoP56726 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SmoP56726 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.27■□□□□ 0.84
SmoP56726 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SmoP56726 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SmoP56726 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
SmoP56726 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SmoP56726 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SmoP56726 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SmoP56726 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SmoP56726 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SmoP56726 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SmoP56726 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SmoP56726 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.26■□□□□ 0.83
SmoP56726 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.26■□□□□ 0.83
SmoP56726 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.26■□□□□ 0.83
SmoP56726 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.26■□□□□ 0.83
SmoP56726 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SmoP56726 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SmoP56726 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SmoP56726 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SmoP56726 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SmoP56726 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SmoP56726 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SmoP56726 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SmoP56726 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SmoP56726 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SmoP56726 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SmoP56726 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SmoP56726 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SmoP56726 Gm43173-201ENSMUST00000202246 593 ntBASIC20.25■□□□□ 0.83
SmoP56726 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SmoP56726 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SmoP56726 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SmoP56726 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.25■□□□□ 0.83
SmoP56726 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SmoP56726 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SmoP56726 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SmoP56726 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SmoP56726 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SmoP56726 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SmoP56726 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SmoP56726 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.24■□□□□ 0.83
SmoP56726 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.24■□□□□ 0.83
SmoP56726 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SmoP56726 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SmoP56726 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SmoP56726 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SmoP56726 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SmoP56726 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.23■□□□□ 0.83
SmoP56726 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SmoP56726 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SmoP56726 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.23■□□□□ 0.83
SmoP56726 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.23■□□□□ 0.83
SmoP56726 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SmoP56726 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SmoP56726 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SmoP56726 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.22■□□□□ 0.83
SmoP56726 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.22■□□□□ 0.83
SmoP56726 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SmoP56726 Gm43017-201ENSMUST00000198296 752 ntBASIC20.22■□□□□ 0.83
SmoP56726 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.22■□□□□ 0.83
SmoP56726 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.22■□□□□ 0.83
SmoP56726 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SmoP56726 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SmoP56726 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SmoP56726 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SmoP56726 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms