Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Hmgcs2P54869 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Hmgcs2P54869 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Hmgcs2P54869 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Hmgcs2P54869 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.61■■□□□ 1.21
Hmgcs2P54869 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Hmgcs2P54869 AV356131-201ENSMUST00000206201 750 ntBASIC22.61■■□□□ 1.21
Hmgcs2P54869 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.61■■□□□ 1.21
Hmgcs2P54869 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Hmgcs2P54869 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Hmgcs2P54869 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Hmgcs2P54869 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Hmgcs2P54869 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Hmgcs2P54869 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Hmgcs2P54869 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
Hmgcs2P54869 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hmgcs2P54869 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hmgcs2P54869 Gm42778-201ENSMUST00000199644 553 ntBASIC22.59■■□□□ 1.21
Hmgcs2P54869 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hmgcs2P54869 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hmgcs2P54869 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hmgcs2P54869 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.59■■□□□ 1.21
Hmgcs2P54869 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hmgcs2P54869 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Hmgcs2P54869 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Hmgcs2P54869 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Hmgcs2P54869 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Hmgcs2P54869 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Hmgcs2P54869 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Hmgcs2P54869 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hmgcs2P54869 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hmgcs2P54869 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hmgcs2P54869 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Hmgcs2P54869 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
Hmgcs2P54869 Mir6236-201ENSMUST00000184437 123 ntBASIC22.57■■□□□ 1.2
Hmgcs2P54869 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hmgcs2P54869 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Hmgcs2P54869 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.56■■□□□ 1.2
Hmgcs2P54869 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Hmgcs2P54869 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Hmgcs2P54869 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hmgcs2P54869 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hmgcs2P54869 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Hmgcs2P54869 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hmgcs2P54869 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Hmgcs2P54869 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Hmgcs2P54869 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hmgcs2P54869 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Hmgcs2P54869 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.55■■□□□ 1.2
Hmgcs2P54869 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Hmgcs2P54869 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hmgcs2P54869 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.54■■□□□ 1.2
Hmgcs2P54869 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.54■■□□□ 1.2
Hmgcs2P54869 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hmgcs2P54869 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hmgcs2P54869 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hmgcs2P54869 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hmgcs2P54869 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hmgcs2P54869 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
Hmgcs2P54869 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hmgcs2P54869 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Hmgcs2P54869 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hmgcs2P54869 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hmgcs2P54869 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hmgcs2P54869 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Hmgcs2P54869 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Hmgcs2P54869 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Hmgcs2P54869 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.52■■□□□ 1.2
Hmgcs2P54869 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.52■■□□□ 1.2
Hmgcs2P54869 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hmgcs2P54869 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Hmgcs2P54869 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Hmgcs2P54869 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.51■■□□□ 1.19
Hmgcs2P54869 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.51■■□□□ 1.19
Hmgcs2P54869 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Hmgcs2P54869 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Hmgcs2P54869 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hmgcs2P54869 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hmgcs2P54869 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Hmgcs2P54869 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hmgcs2P54869 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Hmgcs2P54869 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.5■■□□□ 1.19
Hmgcs2P54869 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hmgcs2P54869 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Hmgcs2P54869 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hmgcs2P54869 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hmgcs2P54869 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hmgcs2P54869 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hmgcs2P54869 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.49■■□□□ 1.19
Hmgcs2P54869 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hmgcs2P54869 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hmgcs2P54869 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hmgcs2P54869 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hmgcs2P54869 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hmgcs2P54869 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hmgcs2P54869 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hmgcs2P54869 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hmgcs2P54869 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hmgcs2P54869 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.48■■□□□ 1.19
Hmgcs2P54869 Gm9988-201ENSMUST00000069786 435 ntBASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms