Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Sox1P53783 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.79■□□□□ 0.92
Sox1P53783 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox1P53783 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox1P53783 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox1P53783 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox1P53783 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox1P53783 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox1P53783 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox1P53783 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.78■□□□□ 0.92
Sox1P53783 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox1P53783 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox1P53783 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox1P53783 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Sox1P53783 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.78■□□□□ 0.92
Sox1P53783 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Sox1P53783 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.78■□□□□ 0.92
Sox1P53783 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.78■□□□□ 0.92
Sox1P53783 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox1P53783 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.78■□□□□ 0.92
Sox1P53783 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox1P53783 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Sox1P53783 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.77■□□□□ 0.92
Sox1P53783 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox1P53783 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox1P53783 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox1P53783 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sox1P53783 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox1P53783 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox1P53783 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox1P53783 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox1P53783 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.76■□□□□ 0.91
Sox1P53783 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.76■□□□□ 0.91
Sox1P53783 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.76■□□□□ 0.91
Sox1P53783 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox1P53783 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sox1P53783 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox1P53783 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox1P53783 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.76■□□□□ 0.91
Sox1P53783 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox1P53783 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox1P53783 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox1P53783 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sox1P53783 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox1P53783 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sox1P53783 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox1P53783 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sox1P53783 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sox1P53783 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sox1P53783 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.74■□□□□ 0.91
Sox1P53783 Trmt13-210ENSMUST00000198454 880 ntBASIC20.74■□□□□ 0.91
Sox1P53783 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sox1P53783 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox1P53783 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox1P53783 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Sox1P53783 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Sox1P53783 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.73■□□□□ 0.91
Sox1P53783 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.73■□□□□ 0.91
Sox1P53783 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sox1P53783 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
Sox1P53783 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox1P53783 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.72■□□□□ 0.91
Sox1P53783 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
Sox1P53783 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox1P53783 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Sox1P53783 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Sox1P53783 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.72■□□□□ 0.91
Sox1P53783 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sox1P53783 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox1P53783 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox1P53783 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Sox1P53783 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.71■□□□□ 0.91
Sox1P53783 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox1P53783 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Sox1P53783 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox1P53783 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox1P53783 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox1P53783 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Sox1P53783 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox1P53783 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sox1P53783 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox1P53783 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.7■□□□□ 0.9
Sox1P53783 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox1P53783 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox1P53783 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox1P53783 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sox1P53783 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.69■□□□□ 0.9
Sox1P53783 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox1P53783 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox1P53783 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox1P53783 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox1P53783 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox1P53783 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox1P53783 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
Sox1P53783 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox1P53783 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sox1P53783 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.68■□□□□ 0.9
Sox1P53783 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.68■□□□□ 0.9
Sox1P53783 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox1P53783 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms