Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.64■□□□□ 0.25
Nkx2-1P50220 Gm7332-201ENSMUST00000118351 454 ntBASIC16.64■□□□□ 0.25
Nkx2-1P50220 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.64■□□□□ 0.25
Nkx2-1P50220 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-1P50220 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.64■□□□□ 0.25
Nkx2-1P50220 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-1P50220 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.64■□□□□ 0.25
Nkx2-1P50220 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-1P50220 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-1P50220 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-1P50220 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nkx2-1P50220 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-1P50220 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-1P50220 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-1P50220 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-1P50220 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.63■□□□□ 0.25
Nkx2-1P50220 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-1P50220 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Nkx2-1P50220 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Nkx2-1P50220 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-1P50220 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.62■□□□□ 0.25
Nkx2-1P50220 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Nkx2-1P50220 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-1P50220 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-1P50220 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-1P50220 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-1P50220 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-1P50220 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.61■□□□□ 0.25
Nkx2-1P50220 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-1P50220 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-1P50220 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-1P50220 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.61■□□□□ 0.25
Nkx2-1P50220 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nkx2-1P50220 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-1P50220 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-1P50220 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nkx2-1P50220 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.61■□□□□ 0.25
Nkx2-1P50220 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-1P50220 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-1P50220 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-1P50220 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.6■□□□□ 0.25
Nkx2-1P50220 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-1P50220 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Nkx2-1P50220 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.6■□□□□ 0.25
Nkx2-1P50220 Gm12366-201ENSMUST00000121722 873 ntBASIC16.6■□□□□ 0.25
Nkx2-1P50220 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.6■□□□□ 0.25
Nkx2-1P50220 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.6■□□□□ 0.25
Nkx2-1P50220 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.6■□□□□ 0.25
Nkx2-1P50220 Gm5786-201ENSMUST00000085368 882 ntBASIC16.6■□□□□ 0.25
Nkx2-1P50220 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-1P50220 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-1P50220 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-1P50220 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-1P50220 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-1P50220 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-1P50220 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.59■□□□□ 0.25
Nkx2-1P50220 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-1P50220 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-1P50220 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-1P50220 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-1P50220 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.59■□□□□ 0.25
Nkx2-1P50220 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-1P50220 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Nkx2-1P50220 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.59■□□□□ 0.25
Nkx2-1P50220 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-1P50220 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-1P50220 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nkx2-1P50220 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Nkx2-1P50220 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-1P50220 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nkx2-1P50220 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.57■□□□□ 0.24
Nkx2-1P50220 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Nkx2-1P50220 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-1P50220 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-1P50220 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.57■□□□□ 0.24
Nkx2-1P50220 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.57■□□□□ 0.24
Nkx2-1P50220 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-1P50220 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-1P50220 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-1P50220 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Nkx2-1P50220 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.56■□□□□ 0.24
Nkx2-1P50220 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-1P50220 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-1P50220 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-1P50220 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-1P50220 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms