Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rph3aP47708 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rph3aP47708 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rph3aP47708 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rph3aP47708 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Rph3aP47708 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rph3aP47708 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rph3aP47708 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rph3aP47708 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rph3aP47708 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rph3aP47708 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rph3aP47708 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.3■□□□□ 0.68
Rph3aP47708 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Rph3aP47708 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rph3aP47708 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rph3aP47708 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rph3aP47708 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rph3aP47708 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rph3aP47708 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rph3aP47708 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rph3aP47708 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rph3aP47708 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rph3aP47708 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rph3aP47708 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rph3aP47708 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rph3aP47708 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rph3aP47708 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rph3aP47708 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rph3aP47708 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rph3aP47708 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rph3aP47708 Gm12922-201ENSMUST00000120626 809 ntBASIC19.28■□□□□ 0.68
Rph3aP47708 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rph3aP47708 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rph3aP47708 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rph3aP47708 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rph3aP47708 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rph3aP47708 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rph3aP47708 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rph3aP47708 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rph3aP47708 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rph3aP47708 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rph3aP47708 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.27■□□□□ 0.68
Rph3aP47708 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.27■□□□□ 0.68
Rph3aP47708 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.27■□□□□ 0.68
Rph3aP47708 Gm43530-201ENSMUST00000195920 274 ntBASIC19.27■□□□□ 0.68
Rph3aP47708 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rph3aP47708 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rph3aP47708 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rph3aP47708 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rph3aP47708 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rph3aP47708 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rph3aP47708 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rph3aP47708 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rph3aP47708 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rph3aP47708 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rph3aP47708 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rph3aP47708 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rph3aP47708 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rph3aP47708 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rph3aP47708 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rph3aP47708 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.26■□□□□ 0.67
Rph3aP47708 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rph3aP47708 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rph3aP47708 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rph3aP47708 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rph3aP47708 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.25■□□□□ 0.67
Rph3aP47708 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rph3aP47708 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Rph3aP47708 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rph3aP47708 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rph3aP47708 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rph3aP47708 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rph3aP47708 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rph3aP47708 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rph3aP47708 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rph3aP47708 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rph3aP47708 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rph3aP47708 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.24■□□□□ 0.67
Rph3aP47708 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.24■□□□□ 0.67
Rph3aP47708 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rph3aP47708 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rph3aP47708 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rph3aP47708 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rph3aP47708 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rph3aP47708 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.23■□□□□ 0.67
Rph3aP47708 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms