Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfsf4P43488 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.43■□□□□ 0.7
Tnfsf4P43488 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfsf4P43488 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Tnfsf4P43488 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfsf4P43488 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Tnfsf4P43488 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf4P43488 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf4P43488 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf4P43488 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf4P43488 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf4P43488 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf4P43488 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
Tnfsf4P43488 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tnfsf4P43488 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.42■□□□□ 0.7
Tnfsf4P43488 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf4P43488 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tnfsf4P43488 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf4P43488 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf4P43488 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Tnfsf4P43488 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf4P43488 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf4P43488 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf4P43488 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf4P43488 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Tnfsf4P43488 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf4P43488 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf4P43488 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf4P43488 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfsf4P43488 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfsf4P43488 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfsf4P43488 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Tnfsf4P43488 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfsf4P43488 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Tnfsf4P43488 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Tnfsf4P43488 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tnfsf4P43488 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Tnfsf4P43488 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.39■□□□□ 0.69
Tnfsf4P43488 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfsf4P43488 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfsf4P43488 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfsf4P43488 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfsf4P43488 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfsf4P43488 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Tnfsf4P43488 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfsf4P43488 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf4P43488 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf4P43488 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf4P43488 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf4P43488 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Tnfsf4P43488 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf4P43488 Gm10232-201ENSMUST00000089221 720 ntBASIC19.38■□□□□ 0.69
Tnfsf4P43488 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf4P43488 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf4P43488 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf4P43488 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf4P43488 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf4P43488 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.37■□□□□ 0.69
Tnfsf4P43488 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf4P43488 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf4P43488 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf4P43488 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf4P43488 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf4P43488 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.37■□□□□ 0.69
Tnfsf4P43488 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.37■□□□□ 0.69
Tnfsf4P43488 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf4P43488 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf4P43488 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Tnfsf4P43488 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf4P43488 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf4P43488 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.36■□□□□ 0.69
Tnfsf4P43488 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf4P43488 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf4P43488 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf4P43488 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf4P43488 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tnfsf4P43488 Iqck-206ENSMUST00000208658 2891 ntBASIC19.36■□□□□ 0.69
Tnfsf4P43488 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Tnfsf4P43488 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf4P43488 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf4P43488 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf4P43488 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.35■□□□□ 0.69
Tnfsf4P43488 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Tnfsf4P43488 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf4P43488 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf4P43488 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf4P43488 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf4P43488 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf4P43488 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Tnfsf4P43488 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf4P43488 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf4P43488 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf4P43488 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf4P43488 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.34■□□□□ 0.69
Tnfsf4P43488 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tnfsf4P43488 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf4P43488 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf4P43488 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tnfsf4P43488 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf4P43488 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms