Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cxcl12P40224 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cxcl12P40224 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cxcl12P40224 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cxcl12P40224 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cxcl12P40224 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21■□□□□ 0.95
Cxcl12P40224 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cxcl12P40224 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cxcl12P40224 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cxcl12P40224 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cxcl12P40224 Gm4968-201ENSMUST00000071458 858 ntBASIC20.99■□□□□ 0.95
Cxcl12P40224 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cxcl12P40224 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cxcl12P40224 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cxcl12P40224 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cxcl12P40224 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cxcl12P40224 Gm8520-201ENSMUST00000186517 868 ntBASIC20.98■□□□□ 0.95
Cxcl12P40224 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.98■□□□□ 0.95
Cxcl12P40224 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.98■□□□□ 0.95
Cxcl12P40224 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cxcl12P40224 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cxcl12P40224 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cxcl12P40224 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cxcl12P40224 Gm22325-201ENSMUST00000158904 308 ntBASIC20.97■□□□□ 0.95
Cxcl12P40224 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Cxcl12P40224 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cxcl12P40224 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cxcl12P40224 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.96■□□□□ 0.95
Cxcl12P40224 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cxcl12P40224 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.96■□□□□ 0.95
Cxcl12P40224 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cxcl12P40224 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cxcl12P40224 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Cxcl12P40224 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cxcl12P40224 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cxcl12P40224 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cxcl12P40224 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.95■□□□□ 0.94
Cxcl12P40224 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cxcl12P40224 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cxcl12P40224 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cxcl12P40224 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cxcl12P40224 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cxcl12P40224 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.95■□□□□ 0.94
Cxcl12P40224 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cxcl12P40224 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cxcl12P40224 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cxcl12P40224 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cxcl12P40224 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.94■□□□□ 0.94
Cxcl12P40224 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Cxcl12P40224 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cxcl12P40224 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cxcl12P40224 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cxcl12P40224 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cxcl12P40224 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Cxcl12P40224 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.93■□□□□ 0.94
Cxcl12P40224 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcl12P40224 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcl12P40224 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.93■□□□□ 0.94
Cxcl12P40224 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcl12P40224 Gm27801-201ENSMUST00000184174 223 ntBASIC20.93■□□□□ 0.94
Cxcl12P40224 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcl12P40224 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcl12P40224 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcl12P40224 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcl12P40224 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcl12P40224 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.92■□□□□ 0.94
Cxcl12P40224 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcl12P40224 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcl12P40224 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcl12P40224 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcl12P40224 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcl12P40224 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcl12P40224 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cxcl12P40224 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Cxcl12P40224 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cxcl12P40224 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.91■□□□□ 0.94
Cxcl12P40224 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.91■□□□□ 0.94
Cxcl12P40224 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cxcl12P40224 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cxcl12P40224 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cxcl12P40224 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cxcl12P40224 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl12P40224 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl12P40224 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl12P40224 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.9■□□□□ 0.94
Cxcl12P40224 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.9■□□□□ 0.94
Cxcl12P40224 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl12P40224 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl12P40224 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl12P40224 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cxcl12P40224 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.89■□□□□ 0.93
Cxcl12P40224 Mir7071-201ENSMUST00000184847 69 ntBASIC20.89■□□□□ 0.93
Cxcl12P40224 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
Cxcl12P40224 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cxcl12P40224 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cxcl12P40224 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.88■□□□□ 0.93
Cxcl12P40224 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cxcl12P40224 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cxcl12P40224 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cxcl12P40224 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 159.6 ms