Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
HmgclP38060 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HmgclP38060 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.88■□□□□ 0.77
HmgclP38060 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HmgclP38060 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HmgclP38060 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HmgclP38060 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HmgclP38060 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HmgclP38060 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HmgclP38060 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HmgclP38060 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.87■□□□□ 0.77
HmgclP38060 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.87■□□□□ 0.77
HmgclP38060 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HmgclP38060 Mir6236-201ENSMUST00000184437 123 ntBASIC19.87■□□□□ 0.77
HmgclP38060 Golgb1-201ENSMUST00000023534 498 ntBASIC19.87■□□□□ 0.77
HmgclP38060 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HmgclP38060 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HmgclP38060 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HmgclP38060 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.87■□□□□ 0.77
HmgclP38060 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HmgclP38060 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HmgclP38060 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HmgclP38060 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HmgclP38060 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.86■□□□□ 0.77
HmgclP38060 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.86■□□□□ 0.77
HmgclP38060 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HmgclP38060 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HmgclP38060 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HmgclP38060 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HmgclP38060 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HmgclP38060 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HmgclP38060 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HmgclP38060 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HmgclP38060 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
HmgclP38060 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HmgclP38060 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HmgclP38060 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HmgclP38060 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HmgclP38060 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HmgclP38060 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HmgclP38060 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.85■□□□□ 0.77
HmgclP38060 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HmgclP38060 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HmgclP38060 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
HmgclP38060 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HmgclP38060 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HmgclP38060 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HmgclP38060 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HmgclP38060 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.84■□□□□ 0.77
HmgclP38060 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HmgclP38060 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HmgclP38060 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HmgclP38060 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HmgclP38060 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HmgclP38060 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.83■□□□□ 0.77
HmgclP38060 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HmgclP38060 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HmgclP38060 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HmgclP38060 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HmgclP38060 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HmgclP38060 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HmgclP38060 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HmgclP38060 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HmgclP38060 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HmgclP38060 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HmgclP38060 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HmgclP38060 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
HmgclP38060 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HmgclP38060 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HmgclP38060 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.81■□□□□ 0.76
HmgclP38060 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HmgclP38060 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HmgclP38060 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
HmgclP38060 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HmgclP38060 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HmgclP38060 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HmgclP38060 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HmgclP38060 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HmgclP38060 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HmgclP38060 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HmgclP38060 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.8■□□□□ 0.76
HmgclP38060 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
HmgclP38060 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HmgclP38060 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HmgclP38060 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HmgclP38060 Gm9847-201ENSMUST00000052528 599 ntBASIC19.8■□□□□ 0.76
HmgclP38060 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HmgclP38060 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HmgclP38060 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HmgclP38060 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HmgclP38060 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HmgclP38060 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HmgclP38060 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HmgclP38060 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.79■□□□□ 0.76
HmgclP38060 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HmgclP38060 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HmgclP38060 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HmgclP38060 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.79■□□□□ 0.76
HmgclP38060 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HmgclP38060 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms