Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LdlrP35951 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
LdlrP35951 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20■□□□□ 0.79
LdlrP35951 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20■□□□□ 0.79
LdlrP35951 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LdlrP35951 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LdlrP35951 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LdlrP35951 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LdlrP35951 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LdlrP35951 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LdlrP35951 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LdlrP35951 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LdlrP35951 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LdlrP35951 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LdlrP35951 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LdlrP35951 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LdlrP35951 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LdlrP35951 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.99■□□□□ 0.79
LdlrP35951 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LdlrP35951 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.99■□□□□ 0.79
LdlrP35951 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LdlrP35951 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LdlrP35951 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.98■□□□□ 0.79
LdlrP35951 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.98■□□□□ 0.79
LdlrP35951 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LdlrP35951 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.97■□□□□ 0.79
LdlrP35951 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.97■□□□□ 0.79
LdlrP35951 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LdlrP35951 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LdlrP35951 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LdlrP35951 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LdlrP35951 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LdlrP35951 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LdlrP35951 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LdlrP35951 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LdlrP35951 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LdlrP35951 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
LdlrP35951 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LdlrP35951 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LdlrP35951 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LdlrP35951 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LdlrP35951 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
LdlrP35951 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LdlrP35951 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.96■□□□□ 0.79
LdlrP35951 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LdlrP35951 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LdlrP35951 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
LdlrP35951 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LdlrP35951 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
LdlrP35951 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LdlrP35951 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LdlrP35951 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.95■□□□□ 0.78
LdlrP35951 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.95■□□□□ 0.78
LdlrP35951 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.95■□□□□ 0.78
LdlrP35951 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LdlrP35951 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
LdlrP35951 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LdlrP35951 Gm13241-201ENSMUST00000094493 780 ntBASIC19.95■□□□□ 0.78
LdlrP35951 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LdlrP35951 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LdlrP35951 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LdlrP35951 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LdlrP35951 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.94■□□□□ 0.78
LdlrP35951 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LdlrP35951 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LdlrP35951 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LdlrP35951 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LdlrP35951 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LdlrP35951 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
LdlrP35951 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LdlrP35951 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LdlrP35951 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
LdlrP35951 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LdlrP35951 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LdlrP35951 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.93■□□□□ 0.78
LdlrP35951 Gm7417-201ENSMUST00000192950 473 ntBASIC19.93■□□□□ 0.78
LdlrP35951 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LdlrP35951 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.93■□□□□ 0.78
LdlrP35951 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LdlrP35951 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.93■□□□□ 0.78
LdlrP35951 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.93■□□□□ 0.78
LdlrP35951 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LdlrP35951 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LdlrP35951 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LdlrP35951 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LdlrP35951 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LdlrP35951 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.92■□□□□ 0.78
LdlrP35951 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LdlrP35951 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LdlrP35951 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LdlrP35951 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LdlrP35951 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LdlrP35951 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.91■□□□□ 0.78
LdlrP35951 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LdlrP35951 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LdlrP35951 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LdlrP35951 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.9■□□□□ 0.78
LdlrP35951 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LdlrP35951 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LdlrP35951 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms