Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp13P33435 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp13P33435 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp13P33435 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.58■□□□□ 0.89
Mmp13P33435 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp13P33435 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp13P33435 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.57■□□□□ 0.88
Mmp13P33435 Gm40881-201ENSMUST00000223397 166 ntBASIC20.57■□□□□ 0.88
Mmp13P33435 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp13P33435 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Mmp13P33435 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp13P33435 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp13P33435 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Mmp13P33435 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp13P33435 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp13P33435 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Mmp13P33435 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp13P33435 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp13P33435 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp13P33435 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp13P33435 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp13P33435 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp13P33435 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp13P33435 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.55■□□□□ 0.88
Mmp13P33435 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.55■□□□□ 0.88
Mmp13P33435 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp13P33435 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.55■□□□□ 0.88
Mmp13P33435 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp13P33435 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp13P33435 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp13P33435 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp13P33435 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp13P33435 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp13P33435 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp13P33435 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Mmp13P33435 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp13P33435 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.54■□□□□ 0.88
Mmp13P33435 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp13P33435 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp13P33435 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp13P33435 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Mmp13P33435 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.54■□□□□ 0.88
Mmp13P33435 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp13P33435 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp13P33435 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.54■□□□□ 0.88
Mmp13P33435 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp13P33435 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp13P33435 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Mmp13P33435 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp13P33435 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp13P33435 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp13P33435 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp13P33435 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.53■□□□□ 0.88
Mmp13P33435 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp13P33435 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp13P33435 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Mmp13P33435 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp13P33435 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp13P33435 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp13P33435 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp13P33435 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp13P33435 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Mmp13P33435 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp13P33435 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.51■□□□□ 0.87
Mmp13P33435 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp13P33435 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp13P33435 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.51■□□□□ 0.87
Mmp13P33435 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp13P33435 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp13P33435 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Mmp13P33435 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Mmp13P33435 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.51■□□□□ 0.87
Mmp13P33435 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp13P33435 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp13P33435 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp13P33435 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp13P33435 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp13P33435 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp13P33435 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp13P33435 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Mmp13P33435 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp13P33435 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Mmp13P33435 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Mmp13P33435 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Mmp13P33435 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp13P33435 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp13P33435 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp13P33435 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp13P33435 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp13P33435 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.49■□□□□ 0.87
Mmp13P33435 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp13P33435 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.49■□□□□ 0.87
Mmp13P33435 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp13P33435 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Mmp13P33435 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp13P33435 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp13P33435 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp13P33435 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.49■□□□□ 0.87
Mmp13P33435 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp13P33435 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms