Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a1P31648 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Slc6a1P31648 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a1P31648 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a1P31648 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Slc6a1P31648 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.22■□□□□ 0.35
Slc6a1P31648 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a1P31648 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a1P31648 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a1P31648 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a1P31648 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a1P31648 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a1P31648 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a1P31648 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a1P31648 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a1P31648 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a1P31648 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a1P31648 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Slc6a1P31648 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a1P31648 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a1P31648 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a1P31648 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a1P31648 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a1P31648 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.21■□□□□ 0.35
Slc6a1P31648 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a1P31648 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.21■□□□□ 0.35
Slc6a1P31648 Golph3-205ENSMUST00000228671 2842 ntBASIC17.21■□□□□ 0.35
Slc6a1P31648 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a1P31648 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a1P31648 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a1P31648 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a1P31648 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc6a1P31648 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a1P31648 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a1P31648 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a1P31648 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a1P31648 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a1P31648 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a1P31648 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.2■□□□□ 0.34
Slc6a1P31648 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a1P31648 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a1P31648 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a1P31648 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a1P31648 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a1P31648 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.19■□□□□ 0.34
Slc6a1P31648 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.19■□□□□ 0.34
Slc6a1P31648 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a1P31648 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Slc6a1P31648 Gm5921-201ENSMUST00000075898 882 ntBASIC17.19■□□□□ 0.34
Slc6a1P31648 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a1P31648 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a1P31648 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a1P31648 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a1P31648 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Slc6a1P31648 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a1P31648 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a1P31648 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a1P31648 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a1P31648 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.18■□□□□ 0.34
Slc6a1P31648 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Slc6a1P31648 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Slc6a1P31648 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a1P31648 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a1P31648 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a1P31648 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a1P31648 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a1P31648 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a1P31648 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a1P31648 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a1P31648 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a1P31648 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a1P31648 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.17■□□□□ 0.34
Slc6a1P31648 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Slc6a1P31648 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a1P31648 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a1P31648 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc6a1P31648 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Slc6a1P31648 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a1P31648 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.16■□□□□ 0.34
Slc6a1P31648 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a1P31648 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a1P31648 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc6a1P31648 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a1P31648 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a1P31648 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Slc6a1P31648 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a1P31648 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a1P31648 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Slc6a1P31648 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Slc6a1P31648 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a1P31648 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Slc6a1P31648 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
Slc6a1P31648 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a1P31648 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a1P31648 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.15■□□□□ 0.34
Slc6a1P31648 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.15■□□□□ 0.34
Slc6a1P31648 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc6a1P31648 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.14■□□□□ 0.34
Slc6a1P31648 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.14■□□□□ 0.34
Slc6a1P31648 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms