Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nfkb1P25799 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nfkb1P25799 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nfkb1P25799 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nfkb1P25799 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nfkb1P25799 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.71■□□□□ 0.91
Nfkb1P25799 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nfkb1P25799 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nfkb1P25799 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nfkb1P25799 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nfkb1P25799 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nfkb1P25799 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.71■□□□□ 0.91
Nfkb1P25799 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Nfkb1P25799 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.71■□□□□ 0.91
Nfkb1P25799 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nfkb1P25799 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nfkb1P25799 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.71■□□□□ 0.91
Nfkb1P25799 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nfkb1P25799 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nfkb1P25799 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Nfkb1P25799 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nfkb1P25799 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nfkb1P25799 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Nfkb1P25799 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Nfkb1P25799 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nfkb1P25799 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nfkb1P25799 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nfkb1P25799 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nfkb1P25799 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.69■□□□□ 0.9
Nfkb1P25799 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nfkb1P25799 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Nfkb1P25799 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Nfkb1P25799 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nfkb1P25799 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nfkb1P25799 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.68■□□□□ 0.9
Nfkb1P25799 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nfkb1P25799 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nfkb1P25799 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Nfkb1P25799 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.67■□□□□ 0.9
Nfkb1P25799 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
Nfkb1P25799 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nfkb1P25799 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nfkb1P25799 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nfkb1P25799 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nfkb1P25799 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.67■□□□□ 0.9
Nfkb1P25799 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nfkb1P25799 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nfkb1P25799 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nfkb1P25799 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nfkb1P25799 Gm18284-201ENSMUST00000172604 624 ntBASIC20.66■□□□□ 0.9
Nfkb1P25799 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.66■□□□□ 0.9
Nfkb1P25799 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nfkb1P25799 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nfkb1P25799 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.66■□□□□ 0.9
Nfkb1P25799 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nfkb1P25799 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nfkb1P25799 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nfkb1P25799 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nfkb1P25799 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nfkb1P25799 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nfkb1P25799 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nfkb1P25799 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nfkb1P25799 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nfkb1P25799 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nfkb1P25799 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nfkb1P25799 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nfkb1P25799 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nfkb1P25799 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nfkb1P25799 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Nfkb1P25799 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.64■□□□□ 0.89
Nfkb1P25799 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.64■□□□□ 0.89
Nfkb1P25799 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nfkb1P25799 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nfkb1P25799 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nfkb1P25799 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nfkb1P25799 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Nfkb1P25799 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nfkb1P25799 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nfkb1P25799 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nfkb1P25799 Gm8495-201ENSMUST00000188740 694 ntBASIC20.63■□□□□ 0.89
Nfkb1P25799 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.63■□□□□ 0.89
Nfkb1P25799 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.63■□□□□ 0.89
Nfkb1P25799 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nfkb1P25799 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nfkb1P25799 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nfkb1P25799 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nfkb1P25799 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Nfkb1P25799 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nfkb1P25799 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nfkb1P25799 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nfkb1P25799 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nfkb1P25799 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nfkb1P25799 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nfkb1P25799 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nfkb1P25799 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nfkb1P25799 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nfkb1P25799 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nfkb1P25799 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nfkb1P25799 Gm26833-201ENSMUST00000180899 440 ntBASIC20.61■□□□□ 0.89
Nfkb1P25799 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms