Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cntn1P12960 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cntn1P12960 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cntn1P12960 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.29■□□□□ 0.68
Cntn1P12960 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cntn1P12960 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Cntn1P12960 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cntn1P12960 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cntn1P12960 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cntn1P12960 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cntn1P12960 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cntn1P12960 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cntn1P12960 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.28■□□□□ 0.68
Cntn1P12960 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cntn1P12960 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cntn1P12960 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cntn1P12960 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cntn1P12960 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cntn1P12960 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cntn1P12960 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cntn1P12960 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cntn1P12960 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cntn1P12960 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.26■□□□□ 0.67
Cntn1P12960 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cntn1P12960 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cntn1P12960 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cntn1P12960 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
Cntn1P12960 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
Cntn1P12960 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cntn1P12960 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cntn1P12960 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cntn1P12960 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntn1P12960 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntn1P12960 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cntn1P12960 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cntn1P12960 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntn1P12960 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.25■□□□□ 0.67
Cntn1P12960 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntn1P12960 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Cntn1P12960 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cntn1P12960 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cntn1P12960 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cntn1P12960 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cntn1P12960 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Cntn1P12960 Gm12251-201ENSMUST00000117893 792 ntBASIC19.24■□□□□ 0.67
Cntn1P12960 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cntn1P12960 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cntn1P12960 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Cntn1P12960 Gm8493-201ENSMUST00000196881 489 ntBASIC19.24■□□□□ 0.67
Cntn1P12960 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cntn1P12960 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cntn1P12960 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.23■□□□□ 0.67
Cntn1P12960 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cntn1P12960 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntn1P12960 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cntn1P12960 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntn1P12960 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cntn1P12960 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cntn1P12960 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.23■□□□□ 0.67
Cntn1P12960 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cntn1P12960 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntn1P12960 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntn1P12960 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cntn1P12960 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntn1P12960 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntn1P12960 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntn1P12960 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cntn1P12960 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.23■□□□□ 0.67
Cntn1P12960 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntn1P12960 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Cntn1P12960 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.22■□□□□ 0.67
Cntn1P12960 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.22■□□□□ 0.67
Cntn1P12960 Gm43017-201ENSMUST00000198296 752 ntBASIC19.22■□□□□ 0.67
Cntn1P12960 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Cntn1P12960 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntn1P12960 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntn1P12960 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntn1P12960 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntn1P12960 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntn1P12960 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntn1P12960 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntn1P12960 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cntn1P12960 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Cntn1P12960 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Cntn1P12960 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.21■□□□□ 0.67
Cntn1P12960 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntn1P12960 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cntn1P12960 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntn1P12960 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntn1P12960 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntn1P12960 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Cntn1P12960 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntn1P12960 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntn1P12960 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntn1P12960 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.2■□□□□ 0.66
Cntn1P12960 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cntn1P12960 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntn1P12960 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cntn1P12960 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntn1P12960 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms