Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fv4P11370 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fv4P11370 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fv4P11370 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fv4P11370 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fv4P11370 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fv4P11370 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.5■□□□□ 0.71
Fv4P11370 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fv4P11370 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Fv4P11370 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fv4P11370 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fv4P11370 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Fv4P11370 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Fv4P11370 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fv4P11370 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Fv4P11370 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.48■□□□□ 0.71
Fv4P11370 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fv4P11370 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fv4P11370 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fv4P11370 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Fv4P11370 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.48■□□□□ 0.71
Fv4P11370 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Fv4P11370 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.48■□□□□ 0.71
Fv4P11370 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fv4P11370 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fv4P11370 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.48■□□□□ 0.71
Fv4P11370 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fv4P11370 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fv4P11370 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fv4P11370 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fv4P11370 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Fv4P11370 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Fv4P11370 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.47■□□□□ 0.71
Fv4P11370 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Fv4P11370 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Fv4P11370 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fv4P11370 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fv4P11370 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Fv4P11370 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fv4P11370 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Fv4P11370 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fv4P11370 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fv4P11370 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fv4P11370 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.46■□□□□ 0.71
Fv4P11370 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fv4P11370 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fv4P11370 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fv4P11370 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fv4P11370 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fv4P11370 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fv4P11370 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fv4P11370 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fv4P11370 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fv4P11370 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fv4P11370 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Fv4P11370 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fv4P11370 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Fv4P11370 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Fv4P11370 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fv4P11370 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.43■□□□□ 0.7
Fv4P11370 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fv4P11370 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fv4P11370 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fv4P11370 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.43■□□□□ 0.7
Fv4P11370 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fv4P11370 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Fv4P11370 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fv4P11370 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Fv4P11370 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fv4P11370 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Fv4P11370 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Fv4P11370 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fv4P11370 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fv4P11370 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Fv4P11370 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.42■□□□□ 0.7
Fv4P11370 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.42■□□□□ 0.7
Fv4P11370 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.42■□□□□ 0.7
Fv4P11370 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fv4P11370 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fv4P11370 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fv4P11370 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fv4P11370 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fv4P11370 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.41■□□□□ 0.7
Fv4P11370 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Fv4P11370 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Fv4P11370 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fv4P11370 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fv4P11370 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Fv4P11370 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fv4P11370 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fv4P11370 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Fv4P11370 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fv4P11370 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Fv4P11370 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Fv4P11370 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fv4P11370 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Fv4P11370 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Fv4P11370 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Fv4P11370 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Fv4P11370 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms