Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sod1P08228 AV356131-201ENSMUST00000206201 750 ntBASIC19.18■□□□□ 0.66
Sod1P08228 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sod1P08228 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sod1P08228 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.18■□□□□ 0.66
Sod1P08228 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.18■□□□□ 0.66
Sod1P08228 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sod1P08228 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sod1P08228 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sod1P08228 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.17■□□□□ 0.66
Sod1P08228 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sod1P08228 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sod1P08228 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sod1P08228 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sod1P08228 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sod1P08228 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sod1P08228 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sod1P08228 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.16■□□□□ 0.66
Sod1P08228 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.16■□□□□ 0.66
Sod1P08228 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sod1P08228 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sod1P08228 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Sod1P08228 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Sod1P08228 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.15■□□□□ 0.66
Sod1P08228 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sod1P08228 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Sod1P08228 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Sod1P08228 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sod1P08228 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.15■□□□□ 0.66
Sod1P08228 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sod1P08228 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sod1P08228 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sod1P08228 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sod1P08228 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sod1P08228 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sod1P08228 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Sod1P08228 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.14■□□□□ 0.65
Sod1P08228 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.14■□□□□ 0.65
Sod1P08228 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sod1P08228 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sod1P08228 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.14■□□□□ 0.65
Sod1P08228 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sod1P08228 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Sod1P08228 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.14■□□□□ 0.65
Sod1P08228 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sod1P08228 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sod1P08228 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sod1P08228 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sod1P08228 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sod1P08228 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sod1P08228 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sod1P08228 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sod1P08228 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.12■□□□□ 0.65
Sod1P08228 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.12■□□□□ 0.65
Sod1P08228 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.12■□□□□ 0.65
Sod1P08228 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.12■□□□□ 0.65
Sod1P08228 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sod1P08228 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sod1P08228 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sod1P08228 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Sod1P08228 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sod1P08228 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sod1P08228 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sod1P08228 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sod1P08228 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sod1P08228 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Sod1P08228 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Sod1P08228 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sod1P08228 Gm42778-201ENSMUST00000199644 553 ntBASIC19.1■□□□□ 0.65
Sod1P08228 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sod1P08228 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sod1P08228 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sod1P08228 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sod1P08228 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sod1P08228 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sod1P08228 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sod1P08228 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sod1P08228 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.09■□□□□ 0.65
Sod1P08228 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sod1P08228 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sod1P08228 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sod1P08228 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sod1P08228 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sod1P08228 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sod1P08228 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.08■□□□□ 0.64
Sod1P08228 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.08■□□□□ 0.64
Sod1P08228 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sod1P08228 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sod1P08228 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sod1P08228 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.07■□□□□ 0.64
Sod1P08228 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.07■□□□□ 0.64
Sod1P08228 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sod1P08228 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sod1P08228 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Sod1P08228 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.07■□□□□ 0.64
Sod1P08228 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sod1P08228 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.07■□□□□ 0.64
Sod1P08228 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sod1P08228 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sod1P08228 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms