Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.34■□□□□ 0.85
PdgfrbP05622 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfrbP05622 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfrbP05622 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfrbP05622 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PdgfrbP05622 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PdgfrbP05622 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PdgfrbP05622 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PdgfrbP05622 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PdgfrbP05622 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PdgfrbP05622 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PdgfrbP05622 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PdgfrbP05622 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PdgfrbP05622 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PdgfrbP05622 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PdgfrbP05622 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PdgfrbP05622 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PdgfrbP05622 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PdgfrbP05622 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.31■□□□□ 0.84
PdgfrbP05622 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PdgfrbP05622 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PdgfrbP05622 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PdgfrbP05622 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PdgfrbP05622 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PdgfrbP05622 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PdgfrbP05622 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PdgfrbP05622 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PdgfrbP05622 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PdgfrbP05622 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.3■□□□□ 0.84
PdgfrbP05622 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PdgfrbP05622 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PdgfrbP05622 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PdgfrbP05622 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PdgfrbP05622 Gm43530-201ENSMUST00000195920 274 ntBASIC20.3■□□□□ 0.84
PdgfrbP05622 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PdgfrbP05622 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PdgfrbP05622 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PdgfrbP05622 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.29■□□□□ 0.84
PdgfrbP05622 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.29■□□□□ 0.84
PdgfrbP05622 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.29■□□□□ 0.84
PdgfrbP05622 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PdgfrbP05622 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.29■□□□□ 0.84
PdgfrbP05622 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfrbP05622 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PdgfrbP05622 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PdgfrbP05622 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PdgfrbP05622 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PdgfrbP05622 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.28■□□□□ 0.84
PdgfrbP05622 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PdgfrbP05622 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.28■□□□□ 0.84
PdgfrbP05622 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PdgfrbP05622 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PdgfrbP05622 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
PdgfrbP05622 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PdgfrbP05622 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.28■□□□□ 0.84
PdgfrbP05622 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PdgfrbP05622 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PdgfrbP05622 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PdgfrbP05622 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PdgfrbP05622 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PdgfrbP05622 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PdgfrbP05622 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.27■□□□□ 0.84
PdgfrbP05622 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PdgfrbP05622 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PdgfrbP05622 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PdgfrbP05622 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PdgfrbP05622 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PdgfrbP05622 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PdgfrbP05622 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PdgfrbP05622 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PdgfrbP05622 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PdgfrbP05622 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.26■□□□□ 0.83
PdgfrbP05622 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PdgfrbP05622 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PdgfrbP05622 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PdgfrbP05622 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PdgfrbP05622 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PdgfrbP05622 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PdgfrbP05622 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfrbP05622 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PdgfrbP05622 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.25■□□□□ 0.83
PdgfrbP05622 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.25■□□□□ 0.83
PdgfrbP05622 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.25■□□□□ 0.83
PdgfrbP05622 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfrbP05622 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.25■□□□□ 0.83
PdgfrbP05622 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms