Protein–RNA interactions for Protein: P01867

Igh-3, Ig gamma-2B chain C region, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-3P01867 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-3P01867 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-3P01867 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-3P01867 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-3P01867 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-3P01867 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.59■□□□□ 0.41
Igh-3P01867 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-3P01867 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-3P01867 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-3P01867 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-3P01867 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-3P01867 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igh-3P01867 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igh-3P01867 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Igh-3P01867 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igh-3P01867 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igh-3P01867 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Igh-3P01867 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Igh-3P01867 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.58■□□□□ 0.4
Igh-3P01867 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igh-3P01867 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igh-3P01867 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Igh-3P01867 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igh-3P01867 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igh-3P01867 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Igh-3P01867 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igh-3P01867 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igh-3P01867 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igh-3P01867 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Igh-3P01867 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igh-3P01867 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Igh-3P01867 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igh-3P01867 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Igh-3P01867 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Igh-3P01867 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igh-3P01867 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.57■□□□□ 0.4
Igh-3P01867 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.57■□□□□ 0.4
Igh-3P01867 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.56■□□□□ 0.4
Igh-3P01867 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igh-3P01867 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Igh-3P01867 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Igh-3P01867 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igh-3P01867 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Igh-3P01867 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igh-3P01867 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Igh-3P01867 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Igh-3P01867 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igh-3P01867 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Igh-3P01867 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-3P01867 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-3P01867 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-3P01867 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-3P01867 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-3P01867 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-3P01867 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-3P01867 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-3P01867 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-3P01867 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Igh-3P01867 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-3P01867 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Igh-3P01867 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-3P01867 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-3P01867 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-3P01867 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-3P01867 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.54■□□□□ 0.4
Igh-3P01867 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-3P01867 Gm27454-201ENSMUST00000185090 204 ntBASIC17.54■□□□□ 0.4
Igh-3P01867 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-3P01867 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-3P01867 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-3P01867 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-3P01867 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.54■□□□□ 0.4
Igh-3P01867 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-3P01867 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Igh-3P01867 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igh-3P01867 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igh-3P01867 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Igh-3P01867 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.53■□□□□ 0.4
Igh-3P01867 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igh-3P01867 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igh-3P01867 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igh-3P01867 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igh-3P01867 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Igh-3P01867 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igh-3P01867 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.52■□□□□ 0.4
Igh-3P01867 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igh-3P01867 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igh-3P01867 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igh-3P01867 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igh-3P01867 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Igh-3P01867 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.52■□□□□ 0.4
Igh-3P01867 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.52■□□□□ 0.4
Igh-3P01867 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.52■□□□□ 0.4
Igh-3P01867 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Igh-3P01867 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igh-3P01867 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igh-3P01867 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.52■□□□□ 0.39
Igh-3P01867 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Igh-3P01867 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igh-3P01867 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms