Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShdO88834 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShdO88834 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShdO88834 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.59■□□□□ 0.89
ShdO88834 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShdO88834 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShdO88834 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ShdO88834 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.59■□□□□ 0.89
ShdO88834 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShdO88834 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShdO88834 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShdO88834 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShdO88834 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ShdO88834 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShdO88834 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ShdO88834 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ShdO88834 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ShdO88834 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ShdO88834 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ShdO88834 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ShdO88834 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
ShdO88834 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ShdO88834 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
ShdO88834 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ShdO88834 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ShdO88834 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ShdO88834 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShdO88834 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.57■□□□□ 0.88
ShdO88834 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShdO88834 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShdO88834 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ShdO88834 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShdO88834 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShdO88834 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShdO88834 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShdO88834 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.57■□□□□ 0.88
ShdO88834 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShdO88834 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ShdO88834 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.56■□□□□ 0.88
ShdO88834 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShdO88834 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ShdO88834 Gm43530-201ENSMUST00000195920 274 ntBASIC20.56■□□□□ 0.88
ShdO88834 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ShdO88834 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ShdO88834 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ShdO88834 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShdO88834 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.56■□□□□ 0.88
ShdO88834 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.55■□□□□ 0.88
ShdO88834 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ShdO88834 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ShdO88834 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ShdO88834 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
ShdO88834 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ShdO88834 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ShdO88834 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
ShdO88834 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ShdO88834 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.54■□□□□ 0.88
ShdO88834 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.54■□□□□ 0.88
ShdO88834 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ShdO88834 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ShdO88834 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ShdO88834 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ShdO88834 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
ShdO88834 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ShdO88834 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ShdO88834 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.53■□□□□ 0.88
ShdO88834 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.53■□□□□ 0.88
ShdO88834 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ShdO88834 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ShdO88834 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ShdO88834 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ShdO88834 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
ShdO88834 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ShdO88834 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ShdO88834 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ShdO88834 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ShdO88834 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
ShdO88834 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ShdO88834 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
ShdO88834 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ShdO88834 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ShdO88834 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.51■□□□□ 0.87
ShdO88834 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ShdO88834 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ShdO88834 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ShdO88834 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ShdO88834 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ShdO88834 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShdO88834 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ShdO88834 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ShdO88834 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShdO88834 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShdO88834 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShdO88834 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShdO88834 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShdO88834 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShdO88834 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShdO88834 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShdO88834 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.49■□□□□ 0.87
ShdO88834 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms