Protein–RNA interactions for Protein: O88552

Cldn2, Claudin-2, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn2O88552 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.61■□□□□ 0.89
Cldn2O88552 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cldn2O88552 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.61■□□□□ 0.89
Cldn2O88552 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.61■□□□□ 0.89
Cldn2O88552 Gm7291-201ENSMUST00000199147 382 ntBASIC20.61■□□□□ 0.89
Cldn2O88552 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.61■□□□□ 0.89
Cldn2O88552 Gm42642-201ENSMUST00000200683 355 ntBASIC20.61■□□□□ 0.89
Cldn2O88552 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn2O88552 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn2O88552 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn2O88552 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn2O88552 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cldn2O88552 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn2O88552 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn2O88552 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.6■□□□□ 0.89
Cldn2O88552 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.6■□□□□ 0.89
Cldn2O88552 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cldn2O88552 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn2O88552 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn2O88552 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn2O88552 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.59■□□□□ 0.89
Cldn2O88552 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Cldn2O88552 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.59■□□□□ 0.89
Cldn2O88552 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn2O88552 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.59■□□□□ 0.89
Cldn2O88552 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.59■□□□□ 0.89
Cldn2O88552 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn2O88552 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn2O88552 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn2O88552 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn2O88552 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn2O88552 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn2O88552 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn2O88552 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn2O88552 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cldn2O88552 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cldn2O88552 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cldn2O88552 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Cldn2O88552 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.57■□□□□ 0.88
Cldn2O88552 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.57■□□□□ 0.88
Cldn2O88552 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn2O88552 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn2O88552 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn2O88552 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.56■□□□□ 0.88
Cldn2O88552 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn2O88552 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn2O88552 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn2O88552 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cldn2O88552 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn2O88552 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn2O88552 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn2O88552 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn2O88552 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn2O88552 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn2O88552 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn2O88552 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn2O88552 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn2O88552 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn2O88552 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn2O88552 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn2O88552 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn2O88552 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn2O88552 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn2O88552 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn2O88552 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn2O88552 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn2O88552 Gm10849-201ENSMUST00000100397 618 ntBASIC20.54■□□□□ 0.88
Cldn2O88552 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn2O88552 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn2O88552 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn2O88552 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cldn2O88552 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn2O88552 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cldn2O88552 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cldn2O88552 Gm27405-201ENSMUST00000184201 112 ntBASIC20.53■□□□□ 0.88
Cldn2O88552 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn2O88552 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn2O88552 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn2O88552 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn2O88552 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn2O88552 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn2O88552 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn2O88552 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.52■□□□□ 0.88
Cldn2O88552 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.52■□□□□ 0.88
Cldn2O88552 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.52■□□□□ 0.88
Cldn2O88552 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn2O88552 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn2O88552 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn2O88552 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.52■□□□□ 0.88
Cldn2O88552 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn2O88552 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn2O88552 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn2O88552 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.51■□□□□ 0.87
Cldn2O88552 Gm11421-201ENSMUST00000122124 294 ntBASIC20.51■□□□□ 0.87
Cldn2O88552 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.51■□□□□ 0.87
Cldn2O88552 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn2O88552 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn2O88552 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.5■□□□□ 0.87
Cldn2O88552 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn2O88552 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms