Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Capns1O88456 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Capns1O88456 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Capns1O88456 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Capns1O88456 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Capns1O88456 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.5■□□□□ 0.55
Capns1O88456 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.5■□□□□ 0.55
Capns1O88456 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Capns1O88456 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Capns1O88456 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Capns1O88456 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Capns1O88456 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Capns1O88456 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Capns1O88456 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Capns1O88456 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Capns1O88456 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Capns1O88456 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Capns1O88456 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Capns1O88456 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Capns1O88456 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.49■□□□□ 0.55
Capns1O88456 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Capns1O88456 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Capns1O88456 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Capns1O88456 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Capns1O88456 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Capns1O88456 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Capns1O88456 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Capns1O88456 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Capns1O88456 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.48■□□□□ 0.55
Capns1O88456 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Capns1O88456 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Capns1O88456 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Capns1O88456 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Capns1O88456 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.47■□□□□ 0.55
Capns1O88456 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Capns1O88456 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Capns1O88456 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Capns1O88456 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Capns1O88456 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Capns1O88456 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Capns1O88456 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Capns1O88456 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Capns1O88456 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Capns1O88456 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Capns1O88456 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Capns1O88456 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.46■□□□□ 0.55
Capns1O88456 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Capns1O88456 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.46■□□□□ 0.55
Capns1O88456 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Capns1O88456 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Capns1O88456 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Capns1O88456 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Capns1O88456 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Capns1O88456 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Capns1O88456 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Capns1O88456 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.46■□□□□ 0.54
Capns1O88456 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Capns1O88456 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Capns1O88456 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Capns1O88456 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Capns1O88456 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Capns1O88456 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Capns1O88456 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Capns1O88456 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.45■□□□□ 0.54
Capns1O88456 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Capns1O88456 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Capns1O88456 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Capns1O88456 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Capns1O88456 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Capns1O88456 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Capns1O88456 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.45■□□□□ 0.54
Capns1O88456 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Capns1O88456 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Capns1O88456 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Capns1O88456 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Capns1O88456 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Capns1O88456 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Capns1O88456 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Capns1O88456 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Capns1O88456 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Capns1O88456 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Capns1O88456 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Capns1O88456 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Capns1O88456 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Capns1O88456 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Capns1O88456 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Capns1O88456 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Capns1O88456 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.43■□□□□ 0.54
Capns1O88456 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Capns1O88456 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Capns1O88456 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Capns1O88456 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.43■□□□□ 0.54
Capns1O88456 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.43■□□□□ 0.54
Capns1O88456 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Capns1O88456 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Capns1O88456 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Capns1O88456 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
Capns1O88456 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.43■□□□□ 0.54
Capns1O88456 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Capns1O88456 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms