Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Ubr1O70481 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC26.68■■□□□ 1.86
Ubr1O70481 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ubr1O70481 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ubr1O70481 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Ubr1O70481 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Ubr1O70481 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ubr1O70481 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ubr1O70481 Gm14281-201ENSMUST00000121700 1294 ntBASIC26.66■■□□□ 1.86
Ubr1O70481 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC26.66■■□□□ 1.86
Ubr1O70481 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ubr1O70481 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC26.66■■□□□ 1.86
Ubr1O70481 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ubr1O70481 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ubr1O70481 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ubr1O70481 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ubr1O70481 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ubr1O70481 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ubr1O70481 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ubr1O70481 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC26.66■■□□□ 1.86
Ubr1O70481 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Ubr1O70481 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ubr1O70481 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ubr1O70481 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC26.65■■□□□ 1.86
Ubr1O70481 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ubr1O70481 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ubr1O70481 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ubr1O70481 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC26.64■■□□□ 1.86
Ubr1O70481 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Ubr1O70481 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ubr1O70481 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Ubr1O70481 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Ubr1O70481 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Ubr1O70481 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ubr1O70481 Gm18671-201ENSMUST00000214826 683 ntBASIC26.63■■□□□ 1.85
Ubr1O70481 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Ubr1O70481 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Ubr1O70481 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ubr1O70481 AC122428.2-201ENSMUST00000216321 1832 ntBASIC26.62■■□□□ 1.85
Ubr1O70481 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Ubr1O70481 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC26.62■■□□□ 1.85
Ubr1O70481 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC26.62■■□□□ 1.85
Ubr1O70481 AV356131-201ENSMUST00000206201 750 ntBASIC26.62■■□□□ 1.85
Ubr1O70481 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ubr1O70481 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Ubr1O70481 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ubr1O70481 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ubr1O70481 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ubr1O70481 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Ubr1O70481 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC26.59■■□□□ 1.85
Ubr1O70481 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ubr1O70481 Gm27801-201ENSMUST00000184174 223 ntBASIC26.59■■□□□ 1.85
Ubr1O70481 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ubr1O70481 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC26.59■■□□□ 1.85
Ubr1O70481 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ubr1O70481 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ubr1O70481 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ubr1O70481 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC26.58■■□□□ 1.85
Ubr1O70481 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Ubr1O70481 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ubr1O70481 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC26.58■■□□□ 1.85
Ubr1O70481 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Ubr1O70481 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Ubr1O70481 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
Ubr1O70481 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ubr1O70481 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC26.57■■□□□ 1.84
Ubr1O70481 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ubr1O70481 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ubr1O70481 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ubr1O70481 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC26.56■■□□□ 1.84
Ubr1O70481 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr1O70481 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr1O70481 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC26.56■■□□□ 1.84
Ubr1O70481 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC26.56■■□□□ 1.84
Ubr1O70481 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr1O70481 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC26.56■■□□□ 1.84
Ubr1O70481 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr1O70481 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr1O70481 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr1O70481 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr1O70481 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr1O70481 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Ubr1O70481 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Ubr1O70481 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr1O70481 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr1O70481 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr1O70481 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr1O70481 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr1O70481 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC26.56■■□□□ 1.84
Ubr1O70481 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr1O70481 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ubr1O70481 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Ubr1O70481 Gm27011-201ENSMUST00000182352 972 ntBASIC26.55■■□□□ 1.84
Ubr1O70481 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ubr1O70481 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Ubr1O70481 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ubr1O70481 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ubr1O70481 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Ubr1O70481 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC26.54■■□□□ 1.84
Ubr1O70481 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms