Protein–RNA interactions for Protein: O55234

Psmb5, Proteasome subunit beta type-5, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmb5O55234 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.31■□□□□ 0.68
Psmb5O55234 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Psmb5O55234 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Psmb5O55234 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Psmb5O55234 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Psmb5O55234 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Psmb5O55234 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Psmb5O55234 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Psmb5O55234 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Psmb5O55234 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
Psmb5O55234 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Psmb5O55234 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.3■□□□□ 0.68
Psmb5O55234 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Psmb5O55234 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Psmb5O55234 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Psmb5O55234 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Psmb5O55234 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Psmb5O55234 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.29■□□□□ 0.68
Psmb5O55234 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Psmb5O55234 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Psmb5O55234 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Psmb5O55234 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Psmb5O55234 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Psmb5O55234 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Psmb5O55234 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Psmb5O55234 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Psmb5O55234 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Psmb5O55234 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
Psmb5O55234 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Psmb5O55234 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Psmb5O55234 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Psmb5O55234 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Psmb5O55234 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Psmb5O55234 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Psmb5O55234 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Psmb5O55234 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Psmb5O55234 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.27■□□□□ 0.68
Psmb5O55234 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Psmb5O55234 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Psmb5O55234 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Psmb5O55234 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Psmb5O55234 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Psmb5O55234 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.26■□□□□ 0.67
Psmb5O55234 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Psmb5O55234 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Psmb5O55234 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Psmb5O55234 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.26■□□□□ 0.67
Psmb5O55234 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Psmb5O55234 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Psmb5O55234 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Psmb5O55234 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Psmb5O55234 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.25■□□□□ 0.67
Psmb5O55234 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Psmb5O55234 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Psmb5O55234 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Psmb5O55234 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Psmb5O55234 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Psmb5O55234 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.24■□□□□ 0.67
Psmb5O55234 Gm27454-201ENSMUST00000185090 204 ntBASIC19.24■□□□□ 0.67
Psmb5O55234 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.24■□□□□ 0.67
Psmb5O55234 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Psmb5O55234 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Psmb5O55234 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Psmb5O55234 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Psmb5O55234 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Psmb5O55234 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Psmb5O55234 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Psmb5O55234 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Psmb5O55234 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Psmb5O55234 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Psmb5O55234 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Psmb5O55234 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Psmb5O55234 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Psmb5O55234 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.23■□□□□ 0.67
Psmb5O55234 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Psmb5O55234 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
Psmb5O55234 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.23■□□□□ 0.67
Psmb5O55234 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Psmb5O55234 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Psmb5O55234 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Psmb5O55234 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.22■□□□□ 0.67
Psmb5O55234 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Psmb5O55234 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Psmb5O55234 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.22■□□□□ 0.67
Psmb5O55234 Gm43137-201ENSMUST00000198052 594 ntBASIC19.22■□□□□ 0.67
Psmb5O55234 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.22■□□□□ 0.67
Psmb5O55234 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Psmb5O55234 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Psmb5O55234 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Psmb5O55234 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Psmb5O55234 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Psmb5O55234 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Psmb5O55234 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Psmb5O55234 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Psmb5O55234 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Psmb5O55234 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Psmb5O55234 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Psmb5O55234 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Psmb5O55234 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.21■□□□□ 0.67
Psmb5O55234 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms