Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cbx4O55187 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Cbx4O55187 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Cbx4O55187 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cbx4O55187 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cbx4O55187 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cbx4O55187 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cbx4O55187 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cbx4O55187 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.67■□□□□ 0.74
Cbx4O55187 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cbx4O55187 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cbx4O55187 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cbx4O55187 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cbx4O55187 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cbx4O55187 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cbx4O55187 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cbx4O55187 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.66■□□□□ 0.74
Cbx4O55187 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.66■□□□□ 0.74
Cbx4O55187 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.66■□□□□ 0.74
Cbx4O55187 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.66■□□□□ 0.74
Cbx4O55187 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cbx4O55187 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cbx4O55187 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cbx4O55187 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cbx4O55187 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cbx4O55187 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx4O55187 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cbx4O55187 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx4O55187 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx4O55187 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cbx4O55187 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx4O55187 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.64■□□□□ 0.73
Cbx4O55187 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx4O55187 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx4O55187 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx4O55187 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx4O55187 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx4O55187 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.63■□□□□ 0.73
Cbx4O55187 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx4O55187 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx4O55187 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.63■□□□□ 0.73
Cbx4O55187 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.63■□□□□ 0.73
Cbx4O55187 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx4O55187 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx4O55187 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx4O55187 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx4O55187 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx4O55187 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cbx4O55187 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.62■□□□□ 0.73
Cbx4O55187 Gm43530-201ENSMUST00000195920 274 ntBASIC19.62■□□□□ 0.73
Cbx4O55187 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.62■□□□□ 0.73
Cbx4O55187 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cbx4O55187 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.62■□□□□ 0.73
Cbx4O55187 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cbx4O55187 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cbx4O55187 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx4O55187 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx4O55187 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.61■□□□□ 0.73
Cbx4O55187 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.61■□□□□ 0.73
Cbx4O55187 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx4O55187 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cbx4O55187 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx4O55187 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx4O55187 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx4O55187 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx4O55187 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.6■□□□□ 0.73
Cbx4O55187 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx4O55187 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx4O55187 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx4O55187 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cbx4O55187 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx4O55187 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx4O55187 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx4O55187 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx4O55187 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.6■□□□□ 0.73
Cbx4O55187 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx4O55187 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx4O55187 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cbx4O55187 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cbx4O55187 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx4O55187 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx4O55187 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx4O55187 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx4O55187 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cbx4O55187 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx4O55187 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms