Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cacna1bO55017 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1bO55017 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1bO55017 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1bO55017 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1bO55017 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1bO55017 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.51■□□□□ 0.71
Cacna1bO55017 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1bO55017 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1bO55017 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cacna1bO55017 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.51■□□□□ 0.71
Cacna1bO55017 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1bO55017 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1bO55017 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.5■□□□□ 0.71
Cacna1bO55017 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1bO55017 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cacna1bO55017 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1bO55017 Reep4-203ENSMUST00000226563 1444 ntBASIC19.5■□□□□ 0.71
Cacna1bO55017 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1bO55017 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cacna1bO55017 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1bO55017 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.5■□□□□ 0.71
Cacna1bO55017 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.49■□□□□ 0.71
Cacna1bO55017 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1bO55017 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1bO55017 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1bO55017 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.48■□□□□ 0.71
Cacna1bO55017 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Cacna1bO55017 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1bO55017 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1bO55017 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1bO55017 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1bO55017 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Cacna1bO55017 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.48■□□□□ 0.71
Cacna1bO55017 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.48■□□□□ 0.71
Cacna1bO55017 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cacna1bO55017 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1bO55017 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cacna1bO55017 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1bO55017 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1bO55017 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1bO55017 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.47■□□□□ 0.71
Cacna1bO55017 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1bO55017 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1bO55017 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.47■□□□□ 0.71
Cacna1bO55017 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1bO55017 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1bO55017 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Cacna1bO55017 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1bO55017 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1bO55017 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1bO55017 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1bO55017 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1bO55017 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1bO55017 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1bO55017 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1bO55017 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1bO55017 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
Cacna1bO55017 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cacna1bO55017 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1bO55017 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1bO55017 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.46■□□□□ 0.71
Cacna1bO55017 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1bO55017 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1bO55017 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.46■□□□□ 0.71
Cacna1bO55017 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1bO55017 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1bO55017 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1bO55017 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1bO55017 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1bO55017 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cacna1bO55017 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.46■□□□□ 0.71
Cacna1bO55017 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1bO55017 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Cacna1bO55017 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1bO55017 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.45■□□□□ 0.7
Cacna1bO55017 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1bO55017 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Cacna1bO55017 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1bO55017 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1bO55017 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1bO55017 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1bO55017 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1bO55017 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1bO55017 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1bO55017 Gm4968-201ENSMUST00000071458 858 ntBASIC19.44■□□□□ 0.7
Cacna1bO55017 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1bO55017 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1bO55017 Gm13234-201ENSMUST00000120010 747 ntBASIC19.43■□□□□ 0.7
Cacna1bO55017 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.43■□□□□ 0.7
Cacna1bO55017 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1bO55017 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.43■□□□□ 0.7
Cacna1bO55017 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1bO55017 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1bO55017 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1bO55017 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1bO55017 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1bO55017 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1bO55017 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1bO55017 Gm13148-201ENSMUST00000118892 745 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms