Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn5O54942 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn5O54942 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn5O54942 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn5O54942 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn5O54942 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn5O54942 Mir6236-201ENSMUST00000184437 123 ntBASIC20.96■□□□□ 0.95
Cldn5O54942 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn5O54942 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn5O54942 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.96■□□□□ 0.95
Cldn5O54942 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn5O54942 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Cldn5O54942 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.95■□□□□ 0.95
Cldn5O54942 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
Cldn5O54942 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn5O54942 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn5O54942 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn5O54942 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.95■□□□□ 0.94
Cldn5O54942 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn5O54942 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Cldn5O54942 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn5O54942 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cldn5O54942 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn5O54942 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn5O54942 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.95■□□□□ 0.94
Cldn5O54942 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cldn5O54942 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Cldn5O54942 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.95■□□□□ 0.94
Cldn5O54942 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn5O54942 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn5O54942 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn5O54942 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
Cldn5O54942 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn5O54942 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn5O54942 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn5O54942 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn5O54942 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn5O54942 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn5O54942 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Cldn5O54942 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn5O54942 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn5O54942 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Cldn5O54942 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn5O54942 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cldn5O54942 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn5O54942 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn5O54942 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn5O54942 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.93■□□□□ 0.94
Cldn5O54942 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn5O54942 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn5O54942 Gm43173-201ENSMUST00000202246 593 ntBASIC20.93■□□□□ 0.94
Cldn5O54942 Spcs1-204ENSMUST00000226782 949 ntBASIC20.93■□□□□ 0.94
Cldn5O54942 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn5O54942 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cldn5O54942 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn5O54942 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.92■□□□□ 0.94
Cldn5O54942 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn5O54942 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Cldn5O54942 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.92■□□□□ 0.94
Cldn5O54942 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.92■□□□□ 0.94
Cldn5O54942 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn5O54942 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn5O54942 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn5O54942 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn5O54942 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn5O54942 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn5O54942 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn5O54942 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn5O54942 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cldn5O54942 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.91■□□□□ 0.94
Cldn5O54942 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn5O54942 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.91■□□□□ 0.94
Cldn5O54942 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn5O54942 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn5O54942 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
Cldn5O54942 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.91■□□□□ 0.94
Cldn5O54942 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn5O54942 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cldn5O54942 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cldn5O54942 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Cldn5O54942 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn5O54942 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.9■□□□□ 0.94
Cldn5O54942 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Cldn5O54942 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Cldn5O54942 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn5O54942 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cldn5O54942 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn5O54942 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Cldn5O54942 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Cldn5O54942 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn5O54942 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.89■□□□□ 0.93
Cldn5O54942 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn5O54942 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn5O54942 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn5O54942 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn5O54942 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn5O54942 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cldn5O54942 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.88■□□□□ 0.93
Cldn5O54942 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn5O54942 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms