Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Matn3O35701 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Matn3O35701 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Matn3O35701 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.22■□□□□ 0.51
Matn3O35701 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Matn3O35701 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.22■□□□□ 0.51
Matn3O35701 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.22■□□□□ 0.51
Matn3O35701 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.22■□□□□ 0.51
Matn3O35701 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Matn3O35701 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Matn3O35701 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Matn3O35701 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Matn3O35701 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Matn3O35701 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Matn3O35701 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Matn3O35701 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Matn3O35701 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Matn3O35701 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Matn3O35701 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Matn3O35701 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Matn3O35701 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Matn3O35701 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Matn3O35701 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.21■□□□□ 0.51
Matn3O35701 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Matn3O35701 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Matn3O35701 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Matn3O35701 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Matn3O35701 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Matn3O35701 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Matn3O35701 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Matn3O35701 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.2■□□□□ 0.5
Matn3O35701 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Matn3O35701 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Matn3O35701 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Matn3O35701 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Matn3O35701 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Matn3O35701 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.19■□□□□ 0.5
Matn3O35701 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Matn3O35701 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Matn3O35701 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Matn3O35701 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Matn3O35701 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Matn3O35701 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Matn3O35701 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
Matn3O35701 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.18■□□□□ 0.5
Matn3O35701 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Matn3O35701 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Matn3O35701 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Matn3O35701 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Matn3O35701 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Matn3O35701 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Matn3O35701 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Matn3O35701 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Matn3O35701 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Matn3O35701 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Matn3O35701 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Matn3O35701 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.17■□□□□ 0.5
Matn3O35701 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Matn3O35701 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Matn3O35701 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Matn3O35701 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Matn3O35701 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.16■□□□□ 0.5
Matn3O35701 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Matn3O35701 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Matn3O35701 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Matn3O35701 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.16■□□□□ 0.5
Matn3O35701 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.16■□□□□ 0.5
Matn3O35701 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Matn3O35701 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Matn3O35701 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Matn3O35701 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Matn3O35701 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Matn3O35701 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Matn3O35701 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Matn3O35701 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Matn3O35701 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Matn3O35701 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Matn3O35701 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Matn3O35701 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.15■□□□□ 0.5
Matn3O35701 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Matn3O35701 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Matn3O35701 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Matn3O35701 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Matn3O35701 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Matn3O35701 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Matn3O35701 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.14■□□□□ 0.49
Matn3O35701 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Matn3O35701 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Matn3O35701 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Matn3O35701 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Matn3O35701 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Matn3O35701 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Matn3O35701 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Matn3O35701 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Matn3O35701 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Matn3O35701 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Matn3O35701 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Matn3O35701 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Matn3O35701 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.13■□□□□ 0.49
Matn3O35701 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms