Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phox2bO35690 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.19■□□□□ 0.82
Phox2bO35690 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Phox2bO35690 Smad6-203ENSMUST00000179458 273 ntBASIC20.19■□□□□ 0.82
Phox2bO35690 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Phox2bO35690 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Phox2bO35690 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.19■□□□□ 0.82
Phox2bO35690 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phox2bO35690 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phox2bO35690 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phox2bO35690 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phox2bO35690 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phox2bO35690 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phox2bO35690 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Phox2bO35690 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phox2bO35690 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.18■□□□□ 0.82
Phox2bO35690 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Phox2bO35690 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phox2bO35690 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.18■□□□□ 0.82
Phox2bO35690 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phox2bO35690 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Phox2bO35690 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phox2bO35690 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Phox2bO35690 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phox2bO35690 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Phox2bO35690 Gm12527-201ENSMUST00000117967 564 ntBASIC20.17■□□□□ 0.82
Phox2bO35690 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phox2bO35690 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Phox2bO35690 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phox2bO35690 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Phox2bO35690 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Phox2bO35690 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Phox2bO35690 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Phox2bO35690 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Phox2bO35690 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.16■□□□□ 0.82
Phox2bO35690 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phox2bO35690 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Phox2bO35690 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Phox2bO35690 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Phox2bO35690 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phox2bO35690 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Phox2bO35690 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.15■□□□□ 0.82
Phox2bO35690 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.15■□□□□ 0.82
Phox2bO35690 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Phox2bO35690 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Phox2bO35690 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Phox2bO35690 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Phox2bO35690 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Phox2bO35690 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Phox2bO35690 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Phox2bO35690 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.14■□□□□ 0.81
Phox2bO35690 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Phox2bO35690 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Phox2bO35690 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Phox2bO35690 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Phox2bO35690 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Phox2bO35690 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Phox2bO35690 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.13■□□□□ 0.81
Phox2bO35690 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Phox2bO35690 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
Phox2bO35690 Gm4968-201ENSMUST00000071458 858 ntBASIC20.13■□□□□ 0.81
Phox2bO35690 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Phox2bO35690 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Phox2bO35690 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Phox2bO35690 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Phox2bO35690 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Phox2bO35690 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Phox2bO35690 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Phox2bO35690 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.12■□□□□ 0.81
Phox2bO35690 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.12■□□□□ 0.81
Phox2bO35690 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.12■□□□□ 0.81
Phox2bO35690 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.12■□□□□ 0.81
Phox2bO35690 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
Phox2bO35690 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Phox2bO35690 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Phox2bO35690 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Phox2bO35690 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.11■□□□□ 0.81
Phox2bO35690 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.11■□□□□ 0.81
Phox2bO35690 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.11■□□□□ 0.81
Phox2bO35690 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Phox2bO35690 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Phox2bO35690 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Phox2bO35690 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Phox2bO35690 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Phox2bO35690 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Phox2bO35690 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Phox2bO35690 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Phox2bO35690 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Phox2bO35690 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Phox2bO35690 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Phox2bO35690 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Phox2bO35690 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Phox2bO35690 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Phox2bO35690 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Phox2bO35690 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Phox2bO35690 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Phox2bO35690 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Phox2bO35690 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Phox2bO35690 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.09■□□□□ 0.81
Phox2bO35690 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms