Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1O35604 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Npc1O35604 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1O35604 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.59■□□□□ 0.73
Npc1O35604 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1O35604 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1O35604 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1O35604 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1O35604 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1O35604 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1O35604 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1O35604 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1O35604 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1O35604 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1O35604 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Npc1O35604 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Npc1O35604 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Npc1O35604 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Npc1O35604 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Npc1O35604 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Npc1O35604 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.58■□□□□ 0.73
Npc1O35604 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.58■□□□□ 0.72
Npc1O35604 Gm27454-201ENSMUST00000185090 204 ntBASIC19.58■□□□□ 0.72
Npc1O35604 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.58■□□□□ 0.72
Npc1O35604 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Npc1O35604 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Npc1O35604 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Npc1O35604 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1O35604 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Npc1O35604 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.57■□□□□ 0.72
Npc1O35604 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1O35604 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1O35604 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1O35604 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.57■□□□□ 0.72
Npc1O35604 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1O35604 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1O35604 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1O35604 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1O35604 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1O35604 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1O35604 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1O35604 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1O35604 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1O35604 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
Npc1O35604 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.56■□□□□ 0.72
Npc1O35604 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1O35604 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1O35604 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1O35604 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1O35604 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Npc1O35604 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Npc1O35604 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.56■□□□□ 0.72
Npc1O35604 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1O35604 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1O35604 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1O35604 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.55■□□□□ 0.72
Npc1O35604 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1O35604 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Npc1O35604 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1O35604 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1O35604 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1O35604 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Npc1O35604 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.54■□□□□ 0.72
Npc1O35604 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.54■□□□□ 0.72
Npc1O35604 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Npc1O35604 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Npc1O35604 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.54■□□□□ 0.72
Npc1O35604 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.54■□□□□ 0.72
Npc1O35604 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Npc1O35604 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Npc1O35604 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Npc1O35604 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Npc1O35604 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Npc1O35604 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Npc1O35604 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1O35604 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1O35604 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1O35604 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1O35604 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1O35604 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Npc1O35604 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1O35604 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Npc1O35604 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Npc1O35604 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Npc1O35604 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Npc1O35604 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Npc1O35604 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Npc1O35604 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Npc1O35604 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Npc1O35604 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Npc1O35604 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Npc1O35604 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Npc1O35604 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1O35604 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1O35604 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1O35604 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1O35604 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1O35604 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1O35604 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1O35604 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms