Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abca4O35600 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abca4O35600 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abca4O35600 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.28■□□□□ 0.68
Abca4O35600 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abca4O35600 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abca4O35600 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Abca4O35600 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Abca4O35600 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Abca4O35600 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Abca4O35600 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abca4O35600 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abca4O35600 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abca4O35600 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Abca4O35600 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Abca4O35600 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Abca4O35600 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.27■□□□□ 0.68
Abca4O35600 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abca4O35600 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Abca4O35600 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.26■□□□□ 0.67
Abca4O35600 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Abca4O35600 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Abca4O35600 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Abca4O35600 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Abca4O35600 Gm6576-201ENSMUST00000169678 883 ntBASIC19.26■□□□□ 0.67
Abca4O35600 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Abca4O35600 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Abca4O35600 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abca4O35600 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Abca4O35600 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abca4O35600 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abca4O35600 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abca4O35600 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abca4O35600 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.25■□□□□ 0.67
Abca4O35600 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Abca4O35600 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Abca4O35600 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abca4O35600 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abca4O35600 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abca4O35600 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abca4O35600 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abca4O35600 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abca4O35600 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abca4O35600 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abca4O35600 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abca4O35600 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abca4O35600 Gm5643-201ENSMUST00000117081 966 ntBASIC19.24■□□□□ 0.67
Abca4O35600 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.24■□□□□ 0.67
Abca4O35600 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abca4O35600 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abca4O35600 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abca4O35600 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.23■□□□□ 0.67
Abca4O35600 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Abca4O35600 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.23■□□□□ 0.67
Abca4O35600 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.22■□□□□ 0.67
Abca4O35600 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abca4O35600 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Abca4O35600 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.22■□□□□ 0.67
Abca4O35600 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Abca4O35600 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.22■□□□□ 0.67
Abca4O35600 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Abca4O35600 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abca4O35600 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Abca4O35600 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.22■□□□□ 0.67
Abca4O35600 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abca4O35600 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abca4O35600 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.21■□□□□ 0.67
Abca4O35600 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.21■□□□□ 0.67
Abca4O35600 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Abca4O35600 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Abca4O35600 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abca4O35600 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Abca4O35600 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abca4O35600 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abca4O35600 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abca4O35600 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Abca4O35600 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Abca4O35600 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Abca4O35600 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abca4O35600 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abca4O35600 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.19■□□□□ 0.66
Abca4O35600 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Abca4O35600 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Abca4O35600 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.19■□□□□ 0.66
Abca4O35600 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abca4O35600 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abca4O35600 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Abca4O35600 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abca4O35600 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abca4O35600 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abca4O35600 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Abca4O35600 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abca4O35600 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Abca4O35600 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Abca4O35600 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abca4O35600 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abca4O35600 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Abca4O35600 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Abca4O35600 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abca4O35600 Gm9987-201ENSMUST00000069768 567 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms