Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn6O35454 Gm37319-201ENSMUST00000193500 636 ntBASIC21.04■□□□□ 0.96
Clcn6O35454 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC21.04■□□□□ 0.96
Clcn6O35454 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn6O35454 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Clcn6O35454 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn6O35454 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn6O35454 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn6O35454 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Clcn6O35454 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.03■□□□□ 0.96
Clcn6O35454 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.03■□□□□ 0.96
Clcn6O35454 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn6O35454 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn6O35454 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.03■□□□□ 0.96
Clcn6O35454 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn6O35454 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn6O35454 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn6O35454 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn6O35454 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn6O35454 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn6O35454 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn6O35454 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn6O35454 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn6O35454 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.02■□□□□ 0.96
Clcn6O35454 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn6O35454 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.02■□□□□ 0.96
Clcn6O35454 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.02■□□□□ 0.96
Clcn6O35454 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn6O35454 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Clcn6O35454 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.02■□□□□ 0.96
Clcn6O35454 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn6O35454 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Clcn6O35454 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Clcn6O35454 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Clcn6O35454 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Clcn6O35454 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Clcn6O35454 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
Clcn6O35454 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn6O35454 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Clcn6O35454 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Clcn6O35454 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.01■□□□□ 0.95
Clcn6O35454 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn6O35454 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn6O35454 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn6O35454 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn6O35454 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn6O35454 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn6O35454 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Clcn6O35454 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn6O35454 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Clcn6O35454 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn6O35454 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn6O35454 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21■□□□□ 0.95
Clcn6O35454 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21■□□□□ 0.95
Clcn6O35454 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21■□□□□ 0.95
Clcn6O35454 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21■□□□□ 0.95
Clcn6O35454 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21■□□□□ 0.95
Clcn6O35454 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn6O35454 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21■□□□□ 0.95
Clcn6O35454 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21■□□□□ 0.95
Clcn6O35454 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn6O35454 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn6O35454 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn6O35454 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn6O35454 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.99■□□□□ 0.95
Clcn6O35454 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn6O35454 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Clcn6O35454 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn6O35454 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.98■□□□□ 0.95
Clcn6O35454 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn6O35454 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Clcn6O35454 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.98■□□□□ 0.95
Clcn6O35454 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.98■□□□□ 0.95
Clcn6O35454 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn6O35454 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn6O35454 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.98■□□□□ 0.95
Clcn6O35454 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn6O35454 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn6O35454 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn6O35454 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcn6O35454 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Clcn6O35454 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Clcn6O35454 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Clcn6O35454 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.97■□□□□ 0.95
Clcn6O35454 Gm45878-201ENSMUST00000211839 241 ntBASIC20.97■□□□□ 0.95
Clcn6O35454 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.97■□□□□ 0.95
Clcn6O35454 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.97■□□□□ 0.95
Clcn6O35454 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Clcn6O35454 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn6O35454 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn6O35454 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn6O35454 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Clcn6O35454 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn6O35454 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn6O35454 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn6O35454 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Clcn6O35454 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn6O35454 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn6O35454 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Clcn6O35454 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms