Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cx3cl1O35188 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cx3cl1O35188 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cx3cl1O35188 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.82■□□□□ 0.6
Cx3cl1O35188 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cx3cl1O35188 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cx3cl1O35188 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cx3cl1O35188 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.82■□□□□ 0.6
Cx3cl1O35188 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cx3cl1O35188 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cx3cl1O35188 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cx3cl1O35188 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cx3cl1O35188 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cx3cl1O35188 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cx3cl1O35188 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cx3cl1O35188 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cx3cl1O35188 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cx3cl1O35188 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cx3cl1O35188 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.81■□□□□ 0.6
Cx3cl1O35188 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cx3cl1O35188 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cx3cl1O35188 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cx3cl1O35188 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cx3cl1O35188 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cx3cl1O35188 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.8■□□□□ 0.6
Cx3cl1O35188 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cx3cl1O35188 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.8■□□□□ 0.6
Cx3cl1O35188 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cx3cl1O35188 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.8■□□□□ 0.6
Cx3cl1O35188 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.8■□□□□ 0.6
Cx3cl1O35188 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cx3cl1O35188 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.8■□□□□ 0.6
Cx3cl1O35188 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.8■□□□□ 0.6
Cx3cl1O35188 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.8■□□□□ 0.6
Cx3cl1O35188 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cx3cl1O35188 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cx3cl1O35188 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.8■□□□□ 0.6
Cx3cl1O35188 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cx3cl1O35188 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cx3cl1O35188 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cx3cl1O35188 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cx3cl1O35188 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.79■□□□□ 0.6
Cx3cl1O35188 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cx3cl1O35188 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cx3cl1O35188 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cx3cl1O35188 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.79■□□□□ 0.6
Cx3cl1O35188 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cx3cl1O35188 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
Cx3cl1O35188 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cx3cl1O35188 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cx3cl1O35188 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cx3cl1O35188 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cx3cl1O35188 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cx3cl1O35188 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cx3cl1O35188 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cx3cl1O35188 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cx3cl1O35188 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Cx3cl1O35188 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cx3cl1O35188 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cx3cl1O35188 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cx3cl1O35188 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cx3cl1O35188 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cx3cl1O35188 Notumos-201ENSMUST00000151998 2659 ntBASIC18.77■□□□□ 0.6
Cx3cl1O35188 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cx3cl1O35188 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cx3cl1O35188 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cx3cl1O35188 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Cx3cl1O35188 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cx3cl1O35188 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.77■□□□□ 0.6
Cx3cl1O35188 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cx3cl1O35188 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.77■□□□□ 0.6
Cx3cl1O35188 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cx3cl1O35188 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cx3cl1O35188 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cx3cl1O35188 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Cx3cl1O35188 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cl1O35188 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cl1O35188 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cx3cl1O35188 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cl1O35188 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cl1O35188 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cl1O35188 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cl1O35188 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cl1O35188 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cl1O35188 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cx3cl1O35188 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cl1O35188 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cl1O35188 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cl1O35188 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cx3cl1O35188 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cx3cl1O35188 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cx3cl1O35188 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cx3cl1O35188 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cx3cl1O35188 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Cx3cl1O35188 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cx3cl1O35188 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cx3cl1O35188 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cx3cl1O35188 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cx3cl1O35188 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cx3cl1O35188 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms