Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Ndufb11O09111 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.16■□□□□ 0.18
Ndufb11O09111 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufb11O09111 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.16■□□□□ 0.18
Ndufb11O09111 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufb11O09111 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufb11O09111 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.16■□□□□ 0.18
Ndufb11O09111 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.16■□□□□ 0.18
Ndufb11O09111 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufb11O09111 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufb11O09111 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ndufb11O09111 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufb11O09111 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.15■□□□□ 0.18
Ndufb11O09111 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.15■□□□□ 0.18
Ndufb11O09111 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufb11O09111 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.15■□□□□ 0.18
Ndufb11O09111 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufb11O09111 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.15■□□□□ 0.18
Ndufb11O09111 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufb11O09111 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufb11O09111 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufb11O09111 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ndufb11O09111 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Ndufb11O09111 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufb11O09111 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ndufb11O09111 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufb11O09111 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.14■□□□□ 0.17
Ndufb11O09111 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufb11O09111 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ndufb11O09111 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.14■□□□□ 0.17
Ndufb11O09111 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufb11O09111 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufb11O09111 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ndufb11O09111 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufb11O09111 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufb11O09111 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufb11O09111 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ndufb11O09111 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufb11O09111 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufb11O09111 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufb11O09111 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufb11O09111 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ndufb11O09111 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufb11O09111 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ndufb11O09111 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufb11O09111 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufb11O09111 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufb11O09111 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufb11O09111 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ndufb11O09111 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufb11O09111 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ndufb11O09111 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.12■□□□□ 0.17
Ndufb11O09111 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufb11O09111 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.12■□□□□ 0.17
Ndufb11O09111 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufb11O09111 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufb11O09111 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.12■□□□□ 0.17
Ndufb11O09111 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
Ndufb11O09111 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
Ndufb11O09111 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufb11O09111 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ndufb11O09111 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufb11O09111 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufb11O09111 Grk6-206ENSMUST00000224995 2971 ntBASIC16.11■□□□□ 0.17
Ndufb11O09111 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufb11O09111 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufb11O09111 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufb11O09111 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.11■□□□□ 0.17
Ndufb11O09111 Gm24804-201ENSMUST00000174982 85 ntBASIC16.11■□□□□ 0.17
Ndufb11O09111 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Ndufb11O09111 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufb11O09111 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Ndufb11O09111 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufb11O09111 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufb11O09111 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufb11O09111 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufb11O09111 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndufb11O09111 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.1■□□□□ 0.17
Ndufb11O09111 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndufb11O09111 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndufb11O09111 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndufb11O09111 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Ndufb11O09111 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndufb11O09111 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndufb11O09111 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndufb11O09111 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ndufb11O09111 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.1■□□□□ 0.17
Ndufb11O09111 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.09■□□□□ 0.17
Ndufb11O09111 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.09■□□□□ 0.17
Ndufb11O09111 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Ndufb11O09111 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ndufb11O09111 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndufb11O09111 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndufb11O09111 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndufb11O09111 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ndufb11O09111 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndufb11O09111 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ndufb11O09111 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Ndufb11O09111 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Ndufb11O09111 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms