Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr2jO08740 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr2jO08740 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Polr2jO08740 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.31■□□□□ 0.68
Polr2jO08740 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr2jO08740 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr2jO08740 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Polr2jO08740 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Polr2jO08740 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr2jO08740 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2jO08740 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2jO08740 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2jO08740 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2jO08740 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2jO08740 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2jO08740 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.3■□□□□ 0.68
Polr2jO08740 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Polr2jO08740 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.3■□□□□ 0.68
Polr2jO08740 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2jO08740 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.3■□□□□ 0.68
Polr2jO08740 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2jO08740 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2jO08740 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Polr2jO08740 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2jO08740 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2jO08740 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Polr2jO08740 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2jO08740 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2jO08740 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2jO08740 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2jO08740 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Polr2jO08740 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2jO08740 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Polr2jO08740 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr2jO08740 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr2jO08740 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr2jO08740 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.28■□□□□ 0.68
Polr2jO08740 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr2jO08740 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.28■□□□□ 0.68
Polr2jO08740 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.28■□□□□ 0.68
Polr2jO08740 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Polr2jO08740 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr2jO08740 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr2jO08740 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Polr2jO08740 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Polr2jO08740 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Polr2jO08740 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Polr2jO08740 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Polr2jO08740 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Polr2jO08740 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Polr2jO08740 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr2jO08740 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Polr2jO08740 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr2jO08740 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.26■□□□□ 0.67
Polr2jO08740 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.26■□□□□ 0.67
Polr2jO08740 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Polr2jO08740 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr2jO08740 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Polr2jO08740 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.26■□□□□ 0.67
Polr2jO08740 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Polr2jO08740 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr2jO08740 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr2jO08740 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr2jO08740 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.25■□□□□ 0.67
Polr2jO08740 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Polr2jO08740 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr2jO08740 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Polr2jO08740 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr2jO08740 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Polr2jO08740 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Polr2jO08740 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Polr2jO08740 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Polr2jO08740 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.24■□□□□ 0.67
Polr2jO08740 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Polr2jO08740 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Polr2jO08740 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Polr2jO08740 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Polr2jO08740 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Polr2jO08740 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.24■□□□□ 0.67
Polr2jO08740 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Polr2jO08740 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.23■□□□□ 0.67
Polr2jO08740 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.23■□□□□ 0.67
Polr2jO08740 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Polr2jO08740 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Polr2jO08740 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Polr2jO08740 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms