Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3aO08665 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3aO08665 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3aO08665 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3aO08665 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sema3aO08665 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sema3aO08665 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sema3aO08665 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Sema3aO08665 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sema3aO08665 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.35■□□□□ 0.85
Sema3aO08665 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sema3aO08665 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.34■□□□□ 0.85
Sema3aO08665 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sema3aO08665 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sema3aO08665 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Sema3aO08665 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sema3aO08665 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Sema3aO08665 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Sema3aO08665 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sema3aO08665 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sema3aO08665 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sema3aO08665 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sema3aO08665 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sema3aO08665 Mir6236-201ENSMUST00000184437 123 ntBASIC20.33■□□□□ 0.85
Sema3aO08665 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sema3aO08665 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sema3aO08665 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sema3aO08665 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sema3aO08665 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Sema3aO08665 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sema3aO08665 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sema3aO08665 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sema3aO08665 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sema3aO08665 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Sema3aO08665 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sema3aO08665 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.32■□□□□ 0.84
Sema3aO08665 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.32■□□□□ 0.84
Sema3aO08665 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Sema3aO08665 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Sema3aO08665 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sema3aO08665 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sema3aO08665 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sema3aO08665 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sema3aO08665 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sema3aO08665 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sema3aO08665 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.31■□□□□ 0.84
Sema3aO08665 Gm13241-201ENSMUST00000094493 780 ntBASIC20.31■□□□□ 0.84
Sema3aO08665 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sema3aO08665 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sema3aO08665 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.3■□□□□ 0.84
Sema3aO08665 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sema3aO08665 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.3■□□□□ 0.84
Sema3aO08665 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sema3aO08665 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sema3aO08665 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sema3aO08665 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Sema3aO08665 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sema3aO08665 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sema3aO08665 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sema3aO08665 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Sema3aO08665 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sema3aO08665 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.28■□□□□ 0.84
Sema3aO08665 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.28■□□□□ 0.84
Sema3aO08665 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.28■□□□□ 0.84
Sema3aO08665 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sema3aO08665 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sema3aO08665 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sema3aO08665 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sema3aO08665 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sema3aO08665 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sema3aO08665 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sema3aO08665 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sema3aO08665 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sema3aO08665 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sema3aO08665 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sema3aO08665 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sema3aO08665 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sema3aO08665 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Sema3aO08665 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3aO08665 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3aO08665 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3aO08665 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3aO08665 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.26■□□□□ 0.83
Sema3aO08665 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3aO08665 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3aO08665 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3aO08665 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3aO08665 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3aO08665 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sema3aO08665 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.25■□□□□ 0.83
Sema3aO08665 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sema3aO08665 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Sema3aO08665 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sema3aO08665 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sema3aO08665 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
Sema3aO08665 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sema3aO08665 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.24■□□□□ 0.83
Sema3aO08665 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sema3aO08665 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sema3aO08665 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms