Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm11236J3QMS7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm11236J3QMS7 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.26■□□□□ 0.99
Gm11236J3QMS7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm11236J3QMS7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm11236J3QMS7 Gm42569-201ENSMUST00000200539 472 ntBASIC21.26■□□□□ 0.99
Gm11236J3QMS7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Gm11236J3QMS7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.25■□□□□ 0.99
Gm11236J3QMS7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm11236J3QMS7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm11236J3QMS7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.25■□□□□ 0.99
Gm11236J3QMS7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm11236J3QMS7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm11236J3QMS7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm11236J3QMS7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm11236J3QMS7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm11236J3QMS7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.23■□□□□ 0.99
Gm11236J3QMS7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm11236J3QMS7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm11236J3QMS7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.23■□□□□ 0.99
Gm11236J3QMS7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm11236J3QMS7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm11236J3QMS7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm11236J3QMS7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm11236J3QMS7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm11236J3QMS7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.22■□□□□ 0.99
Gm11236J3QMS7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm11236J3QMS7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.22■□□□□ 0.99
Gm11236J3QMS7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm11236J3QMS7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm11236J3QMS7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm11236J3QMS7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm11236J3QMS7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm11236J3QMS7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.21■□□□□ 0.99
Gm11236J3QMS7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm11236J3QMS7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11236J3QMS7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11236J3QMS7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11236J3QMS7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11236J3QMS7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11236J3QMS7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm11236J3QMS7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm11236J3QMS7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Gm11236J3QMS7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm11236J3QMS7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Gm11236J3QMS7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm11236J3QMS7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm11236J3QMS7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm11236J3QMS7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm11236J3QMS7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm11236J3QMS7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm11236J3QMS7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Gm11236J3QMS7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm11236J3QMS7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Gm29257-201ENSMUST00000186115 639 ntBASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Gm10033-202ENSMUST00000211874 928 ntBASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Gm18671-201ENSMUST00000214826 683 ntBASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Gm11236J3QMS7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm11236J3QMS7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm11236J3QMS7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Gm11236J3QMS7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Gm11236J3QMS7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.16■□□□□ 0.98
Gm11236J3QMS7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm11236J3QMS7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Gm11236J3QMS7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm11236J3QMS7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm11236J3QMS7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm11236J3QMS7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm11236J3QMS7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm11236J3QMS7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm11236J3QMS7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.14■□□□□ 0.98
Gm11236J3QMS7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.14■□□□□ 0.97
Gm11236J3QMS7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Gm11236J3QMS7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.14■□□□□ 0.97
Gm11236J3QMS7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.14■□□□□ 0.97
Gm11236J3QMS7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Gm11236J3QMS7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm11236J3QMS7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm11236J3QMS7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Gm11236J3QMS7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm11236J3QMS7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm11236J3QMS7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.13■□□□□ 0.97
Gm11236J3QMS7 Gm37179-201ENSMUST00000194862 823 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms