Protein–RNA interactions for Protein: J3QMQ6

Gm3336, Predicted gene 3336, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3336J3QMQ6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3336J3QMQ6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Gm3336J3QMQ6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Gm3336J3QMQ6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3336J3QMQ6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3336J3QMQ6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Gm3336J3QMQ6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3336J3QMQ6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3336J3QMQ6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3336J3QMQ6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3336J3QMQ6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3336J3QMQ6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Gm3336J3QMQ6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3336J3QMQ6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3336J3QMQ6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3336J3QMQ6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3336J3QMQ6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3336J3QMQ6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3336J3QMQ6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.78■□□□□ 0.92
Gm3336J3QMQ6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
Gm3336J3QMQ6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Gm3336J3QMQ6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Gm3336J3QMQ6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3336J3QMQ6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3336J3QMQ6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3336J3QMQ6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3336J3QMQ6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3336J3QMQ6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3336J3QMQ6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Gm3336J3QMQ6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Gm3336J3QMQ6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3336J3QMQ6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3336J3QMQ6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3336J3QMQ6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3336J3QMQ6 Gm12251-201ENSMUST00000117893 792 ntBASIC20.76■□□□□ 0.91
Gm3336J3QMQ6 Mir6236-201ENSMUST00000184437 123 ntBASIC20.76■□□□□ 0.91
Gm3336J3QMQ6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3336J3QMQ6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3336J3QMQ6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3336J3QMQ6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3336J3QMQ6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3336J3QMQ6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3336J3QMQ6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3336J3QMQ6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.75■□□□□ 0.91
Gm3336J3QMQ6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3336J3QMQ6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Gm3336J3QMQ6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3336J3QMQ6 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.75■□□□□ 0.91
Gm3336J3QMQ6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3336J3QMQ6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3336J3QMQ6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3336J3QMQ6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3336J3QMQ6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3336J3QMQ6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3336J3QMQ6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3336J3QMQ6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3336J3QMQ6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3336J3QMQ6 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.74■□□□□ 0.91
Gm3336J3QMQ6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3336J3QMQ6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3336J3QMQ6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3336J3QMQ6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3336J3QMQ6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Gm3336J3QMQ6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Gm3336J3QMQ6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.73■□□□□ 0.91
Gm3336J3QMQ6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.73■□□□□ 0.91
Gm3336J3QMQ6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3336J3QMQ6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3336J3QMQ6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3336J3QMQ6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3336J3QMQ6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3336J3QMQ6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3336J3QMQ6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3336J3QMQ6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3336J3QMQ6 Mir7075-201ENSMUST00000184187 82 ntBASIC20.72■□□□□ 0.91
Gm3336J3QMQ6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm3336J3QMQ6 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.72■□□□□ 0.91
Gm3336J3QMQ6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3336J3QMQ6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Gm3336J3QMQ6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3336J3QMQ6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3336J3QMQ6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Gm3336J3QMQ6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Gm3336J3QMQ6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.71■□□□□ 0.91
Gm3336J3QMQ6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3336J3QMQ6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3336J3QMQ6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Gm3336J3QMQ6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3336J3QMQ6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3336J3QMQ6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3336J3QMQ6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3336J3QMQ6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3336J3QMQ6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Gm3336J3QMQ6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3336J3QMQ6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3336J3QMQ6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Gm3336J3QMQ6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3336J3QMQ6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Gm3336J3QMQ6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3336J3QMQ6 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms