Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc188F6WEU2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc188F6WEU2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 Gm6365-201ENSMUST00000054711 744 ntBASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc188F6WEU2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc188F6WEU2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc188F6WEU2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc188F6WEU2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc188F6WEU2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc188F6WEU2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.75■□□□□ 0.91
Ccdc188F6WEU2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.75■□□□□ 0.91
Ccdc188F6WEU2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc188F6WEU2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.75■□□□□ 0.91
Ccdc188F6WEU2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc188F6WEU2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc188F6WEU2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc188F6WEU2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc188F6WEU2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc188F6WEU2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.74■□□□□ 0.91
Ccdc188F6WEU2 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.74■□□□□ 0.91
Ccdc188F6WEU2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.74■□□□□ 0.91
Ccdc188F6WEU2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc188F6WEU2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc188F6WEU2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc188F6WEU2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Ccdc188F6WEU2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc188F6WEU2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc188F6WEU2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc188F6WEU2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc188F6WEU2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc188F6WEU2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc188F6WEU2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc188F6WEU2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ccdc188F6WEU2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc188F6WEU2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc188F6WEU2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc188F6WEU2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc188F6WEU2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc188F6WEU2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ccdc188F6WEU2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc188F6WEU2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc188F6WEU2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc188F6WEU2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc188F6WEU2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc188F6WEU2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc188F6WEU2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc188F6WEU2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc188F6WEU2 Gm15565-201ENSMUST00000118890 427 ntBASIC20.7■□□□□ 0.9
Ccdc188F6WEU2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc188F6WEU2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc188F6WEU2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc188F6WEU2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc188F6WEU2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc188F6WEU2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc188F6WEU2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc188F6WEU2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc188F6WEU2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Gm7290-201ENSMUST00000104990 617 ntBASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Gm12918-201ENSMUST00000120234 636 ntBASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Gm15710-201ENSMUST00000121821 636 ntBASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Gm5075-201ENSMUST00000196916 622 ntBASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Gm10819-201ENSMUST00000099988 561 ntBASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc188F6WEU2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc188F6WEU2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc188F6WEU2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.68■□□□□ 0.9
Ccdc188F6WEU2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc188F6WEU2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc188F6WEU2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc188F6WEU2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc188F6WEU2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc188F6WEU2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc188F6WEU2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc188F6WEU2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc188F6WEU2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc188F6WEU2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc188F6WEU2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc188F6WEU2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc188F6WEU2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms