Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC24.44■■□□□ 1.5
Ube4aE9Q735 AC099934.2-201ENSMUST00000196389 70 ntBASIC24.44■■□□□ 1.5
Ube4aE9Q735 AC156953.1-201ENSMUST00000196953 70 ntBASIC24.44■■□□□ 1.5
Ube4aE9Q735 AC157822.2-201ENSMUST00000200291 70 ntBASIC24.44■■□□□ 1.5
Ube4aE9Q735 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ube4aE9Q735 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ube4aE9Q735 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ube4aE9Q735 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ube4aE9Q735 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ube4aE9Q735 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ube4aE9Q735 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ube4aE9Q735 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ube4aE9Q735 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Ube4aE9Q735 Gm11421-201ENSMUST00000122124 294 ntBASIC24.42■■□□□ 1.5
Ube4aE9Q735 Gm26571-201ENSMUST00000181399 666 ntBASIC24.42■■□□□ 1.5
Ube4aE9Q735 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Ube4aE9Q735 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Ube4aE9Q735 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
Ube4aE9Q735 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ube4aE9Q735 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ube4aE9Q735 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC24.42■■□□□ 1.5
Ube4aE9Q735 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ube4aE9Q735 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ube4aE9Q735 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC24.41■■□□□ 1.5
Ube4aE9Q735 Gm42642-201ENSMUST00000200683 355 ntBASIC24.41■■□□□ 1.5
Ube4aE9Q735 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ube4aE9Q735 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ube4aE9Q735 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ube4aE9Q735 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ube4aE9Q735 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ube4aE9Q735 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ube4aE9Q735 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC24.4■■□□□ 1.5
Ube4aE9Q735 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC24.4■■□□□ 1.5
Ube4aE9Q735 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Ube4aE9Q735 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ube4aE9Q735 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
Ube4aE9Q735 Gm10849-201ENSMUST00000100397 618 ntBASIC24.39■■□□□ 1.49
Ube4aE9Q735 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ube4aE9Q735 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ube4aE9Q735 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ube4aE9Q735 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ube4aE9Q735 Gm7291-201ENSMUST00000199147 382 ntBASIC24.38■■□□□ 1.49
Ube4aE9Q735 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Ube4aE9Q735 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC24.38■■□□□ 1.49
Ube4aE9Q735 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC24.37■■□□□ 1.49
Ube4aE9Q735 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ube4aE9Q735 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.37■■□□□ 1.49
Ube4aE9Q735 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ube4aE9Q735 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ube4aE9Q735 Gm5297-201ENSMUST00000198555 1171 ntBASIC24.37■■□□□ 1.49
Ube4aE9Q735 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ube4aE9Q735 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ube4aE9Q735 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ube4aE9Q735 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ube4aE9Q735 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC24.35■■□□□ 1.49
Ube4aE9Q735 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ube4aE9Q735 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ube4aE9Q735 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ube4aE9Q735 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ube4aE9Q735 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube4aE9Q735 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube4aE9Q735 Gm27405-201ENSMUST00000184201 112 ntBASIC24.34■■□□□ 1.49
Ube4aE9Q735 Gm42569-201ENSMUST00000200539 472 ntBASIC24.34■■□□□ 1.49
Ube4aE9Q735 AC137127.1-201ENSMUST00000213466 1078 ntBASIC24.34■■□□□ 1.49
Ube4aE9Q735 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube4aE9Q735 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube4aE9Q735 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube4aE9Q735 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube4aE9Q735 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube4aE9Q735 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ube4aE9Q735 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ube4aE9Q735 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ube4aE9Q735 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ube4aE9Q735 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ube4aE9Q735 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ube4aE9Q735 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ube4aE9Q735 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ube4aE9Q735 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
Ube4aE9Q735 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ube4aE9Q735 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ube4aE9Q735 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ube4aE9Q735 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ube4aE9Q735 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ube4aE9Q735 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC24.31■■□□□ 1.48
Ube4aE9Q735 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ube4aE9Q735 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ube4aE9Q735 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Ube4aE9Q735 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ube4aE9Q735 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ube4aE9Q735 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ube4aE9Q735 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ube4aE9Q735 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ube4aE9Q735 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Ube4aE9Q735 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC24.3■■□□□ 1.48
Ube4aE9Q735 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC24.3■■□□□ 1.48
Ube4aE9Q735 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.3■■□□□ 1.48
Ube4aE9Q735 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ube4aE9Q735 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ube4aE9Q735 Gm32051-202ENSMUST00000197905 2385 ntBASIC24.3■■□□□ 1.48
Ube4aE9Q735 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms