Protein–RNA interactions for Protein: E9Q5E2

BC005561, cDNA sequence BC005561, mousemouse

Predictions only

Length 1,589 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC005561E9Q5E2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
BC005561E9Q5E2 Gm13148-201ENSMUST00000118892 745 ntBASIC31.63■■■□□ 2.65
BC005561E9Q5E2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC31.63■■■□□ 2.65
BC005561E9Q5E2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
BC005561E9Q5E2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
BC005561E9Q5E2 Gm43859-201ENSMUST00000200075 1412 ntBASIC31.62■■■□□ 2.65
BC005561E9Q5E2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
BC005561E9Q5E2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
BC005561E9Q5E2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
BC005561E9Q5E2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
BC005561E9Q5E2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
BC005561E9Q5E2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
BC005561E9Q5E2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
BC005561E9Q5E2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC31.61■■■□□ 2.65
BC005561E9Q5E2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
BC005561E9Q5E2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC31.61■■■□□ 2.65
BC005561E9Q5E2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
BC005561E9Q5E2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
BC005561E9Q5E2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
BC005561E9Q5E2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
BC005561E9Q5E2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC31.6■■■□□ 2.65
BC005561E9Q5E2 Mir5133-201ENSMUST00000174955 77 ntBASIC31.6■■■□□ 2.65
BC005561E9Q5E2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
BC005561E9Q5E2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
BC005561E9Q5E2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
BC005561E9Q5E2 Gm27801-201ENSMUST00000184174 223 ntBASIC31.6■■■□□ 2.65
BC005561E9Q5E2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
BC005561E9Q5E2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
BC005561E9Q5E2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
BC005561E9Q5E2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC31.59■■■□□ 2.65
BC005561E9Q5E2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
BC005561E9Q5E2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
BC005561E9Q5E2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
BC005561E9Q5E2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
BC005561E9Q5E2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
BC005561E9Q5E2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
BC005561E9Q5E2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
BC005561E9Q5E2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
BC005561E9Q5E2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.65
BC005561E9Q5E2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
BC005561E9Q5E2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC31.57■■■□□ 2.64
BC005561E9Q5E2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
BC005561E9Q5E2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
BC005561E9Q5E2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
BC005561E9Q5E2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
BC005561E9Q5E2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
BC005561E9Q5E2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
BC005561E9Q5E2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC31.56■■■□□ 2.64
BC005561E9Q5E2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC31.56■■■□□ 2.64
BC005561E9Q5E2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
BC005561E9Q5E2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
BC005561E9Q5E2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
BC005561E9Q5E2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
BC005561E9Q5E2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
BC005561E9Q5E2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
BC005561E9Q5E2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
BC005561E9Q5E2 Mir7071-201ENSMUST00000184847 69 ntBASIC31.54■■■□□ 2.64
BC005561E9Q5E2 Gm7514-201ENSMUST00000209475 934 ntBASIC31.54■■■□□ 2.64
BC005561E9Q5E2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
BC005561E9Q5E2 Gm20760-201ENSMUST00000179197 648 ntBASIC31.53■■■□□ 2.64
BC005561E9Q5E2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
BC005561E9Q5E2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
BC005561E9Q5E2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
BC005561E9Q5E2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
BC005561E9Q5E2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
BC005561E9Q5E2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
BC005561E9Q5E2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
BC005561E9Q5E2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC31.52■■■□□ 2.64
BC005561E9Q5E2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
BC005561E9Q5E2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
BC005561E9Q5E2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC31.51■■■□□ 2.63
BC005561E9Q5E2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
BC005561E9Q5E2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC31.51■■■□□ 2.63
BC005561E9Q5E2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
BC005561E9Q5E2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
BC005561E9Q5E2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC31.5■■■□□ 2.63
BC005561E9Q5E2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
BC005561E9Q5E2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
BC005561E9Q5E2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
BC005561E9Q5E2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC31.48■■■□□ 2.63
BC005561E9Q5E2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
BC005561E9Q5E2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC31.47■■■□□ 2.63
BC005561E9Q5E2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
BC005561E9Q5E2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
BC005561E9Q5E2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
BC005561E9Q5E2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
BC005561E9Q5E2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
BC005561E9Q5E2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
BC005561E9Q5E2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
BC005561E9Q5E2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC31.46■■■□□ 2.63
BC005561E9Q5E2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
BC005561E9Q5E2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
BC005561E9Q5E2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC31.46■■■□□ 2.63
BC005561E9Q5E2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
BC005561E9Q5E2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
BC005561E9Q5E2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
BC005561E9Q5E2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
BC005561E9Q5E2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
BC005561E9Q5E2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
BC005561E9Q5E2 Gm22240-201ENSMUST00000175225 82 ntBASIC31.45■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms