Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.11■□□□□ 0.49
Gm3543D3Z235 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Gm3543D3Z235 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm3543D3Z235 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Gm3543D3Z235 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm3543D3Z235 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm3543D3Z235 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Gm3543D3Z235 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3543D3Z235 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3543D3Z235 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3543D3Z235 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.1■□□□□ 0.49
Gm3543D3Z235 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.1■□□□□ 0.49
Gm3543D3Z235 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3543D3Z235 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3543D3Z235 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3543D3Z235 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3543D3Z235 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3543D3Z235 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3543D3Z235 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.09■□□□□ 0.49
Gm3543D3Z235 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3543D3Z235 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3543D3Z235 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3543D3Z235 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3543D3Z235 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Gm3543D3Z235 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3543D3Z235 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3543D3Z235 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3543D3Z235 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.09■□□□□ 0.49
Gm3543D3Z235 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3543D3Z235 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3543D3Z235 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm3543D3Z235 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm3543D3Z235 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm3543D3Z235 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm3543D3Z235 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm3543D3Z235 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Gm3543D3Z235 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3543D3Z235 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.08■□□□□ 0.48
Gm3543D3Z235 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3543D3Z235 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3543D3Z235 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3543D3Z235 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3543D3Z235 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm3543D3Z235 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Gm3543D3Z235 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3543D3Z235 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gm3543D3Z235 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Gm3543D3Z235 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3543D3Z235 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3543D3Z235 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3543D3Z235 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3543D3Z235 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3543D3Z235 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Gm3543D3Z235 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gm3543D3Z235 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm3543D3Z235 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Gm3543D3Z235 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3543D3Z235 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3543D3Z235 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3543D3Z235 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3543D3Z235 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.06■□□□□ 0.48
Gm3543D3Z235 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Gm3543D3Z235 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3543D3Z235 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3543D3Z235 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3543D3Z235 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Gm3543D3Z235 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3543D3Z235 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.06■□□□□ 0.48
Gm3543D3Z235 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Gm3543D3Z235 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3543D3Z235 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Gm3543D3Z235 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3543D3Z235 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3543D3Z235 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.05■□□□□ 0.48
Gm3543D3Z235 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3543D3Z235 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Gm3543D3Z235 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Gm3543D3Z235 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3543D3Z235 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3543D3Z235 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3543D3Z235 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3543D3Z235 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3543D3Z235 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Gm3543D3Z235 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.04■□□□□ 0.48
Gm3543D3Z235 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3543D3Z235 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Gm3543D3Z235 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3543D3Z235 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3543D3Z235 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3543D3Z235 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3543D3Z235 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3543D3Z235 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3543D3Z235 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3543D3Z235 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3543D3Z235 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3543D3Z235 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3543D3Z235 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3543D3Z235 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3543D3Z235 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3543D3Z235 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms