Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank1D3YZU1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shank1D3YZU1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Shank1D3YZU1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank1D3YZU1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.04■□□□□ 0.48
Shank1D3YZU1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.04■□□□□ 0.48
Shank1D3YZU1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Shank1D3YZU1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank1D3YZU1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.03■□□□□ 0.48
Shank1D3YZU1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Shank1D3YZU1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank1D3YZU1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank1D3YZU1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank1D3YZU1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank1D3YZU1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.02■□□□□ 0.48
Shank1D3YZU1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Shank1D3YZU1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank1D3YZU1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.02■□□□□ 0.48
Shank1D3YZU1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank1D3YZU1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shank1D3YZU1 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.02■□□□□ 0.48
Shank1D3YZU1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.02■□□□□ 0.47
Shank1D3YZU1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Shank1D3YZU1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shank1D3YZU1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank1D3YZU1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank1D3YZU1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.01■□□□□ 0.47
Shank1D3YZU1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shank1D3YZU1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank1D3YZU1 Gm12441-201ENSMUST00000121806 588 ntBASIC18.01■□□□□ 0.47
Shank1D3YZU1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shank1D3YZU1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shank1D3YZU1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank1D3YZU1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Shank1D3YZU1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank1D3YZU1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Shank1D3YZU1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18■□□□□ 0.47
Shank1D3YZU1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18■□□□□ 0.47
Shank1D3YZU1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18■□□□□ 0.47
Shank1D3YZU1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank1D3YZU1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Shank1D3YZU1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank1D3YZU1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank1D3YZU1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Shank1D3YZU1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank1D3YZU1 Ap3s1-204ENSMUST00000225520 957 ntBASIC18■□□□□ 0.47
Shank1D3YZU1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Shank1D3YZU1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18■□□□□ 0.47
Shank1D3YZU1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank1D3YZU1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank1D3YZU1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.99■□□□□ 0.47
Shank1D3YZU1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Shank1D3YZU1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank1D3YZU1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.99■□□□□ 0.47
Shank1D3YZU1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank1D3YZU1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Shank1D3YZU1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.99■□□□□ 0.47
Shank1D3YZU1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank1D3YZU1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Shank1D3YZU1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank1D3YZU1 Gm10653-202ENSMUST00000139570 835 ntBASIC17.98■□□□□ 0.47
Shank1D3YZU1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shank1D3YZU1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Shank1D3YZU1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shank1D3YZU1 Reep4-203ENSMUST00000226563 1444 ntBASIC17.98■□□□□ 0.47
Shank1D3YZU1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shank1D3YZU1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shank1D3YZU1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shank1D3YZU1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shank1D3YZU1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.97■□□□□ 0.47
Shank1D3YZU1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.97■□□□□ 0.47
Shank1D3YZU1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Shank1D3YZU1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms