Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm11127A7VMS2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Gm11127A7VMS2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm11127A7VMS2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm11127A7VMS2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm11127A7VMS2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm11127A7VMS2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm11127A7VMS2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Gm11127A7VMS2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Gm11127A7VMS2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm11127A7VMS2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Gm11127A7VMS2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gm11127A7VMS2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm11127A7VMS2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm11127A7VMS2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm11127A7VMS2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.7■□□□□ 0.42
Gm11127A7VMS2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm11127A7VMS2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm11127A7VMS2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Gm11127A7VMS2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm11127A7VMS2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm11127A7VMS2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm11127A7VMS2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm11127A7VMS2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.69■□□□□ 0.42
Gm11127A7VMS2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.69■□□□□ 0.42
Gm11127A7VMS2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.69■□□□□ 0.42
Gm11127A7VMS2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm11127A7VMS2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm11127A7VMS2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm11127A7VMS2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm11127A7VMS2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm11127A7VMS2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm11127A7VMS2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gm11127A7VMS2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm11127A7VMS2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm11127A7VMS2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm11127A7VMS2 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.67■□□□□ 0.42
Gm11127A7VMS2 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.67■□□□□ 0.42
Gm11127A7VMS2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gm11127A7VMS2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm11127A7VMS2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gm11127A7VMS2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm11127A7VMS2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Gm11127A7VMS2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm11127A7VMS2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm11127A7VMS2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm11127A7VMS2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm11127A7VMS2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm11127A7VMS2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm11127A7VMS2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm11127A7VMS2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gm11127A7VMS2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gm11127A7VMS2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm11127A7VMS2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm11127A7VMS2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm11127A7VMS2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm11127A7VMS2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Gm11127A7VMS2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm11127A7VMS2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm11127A7VMS2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm11127A7VMS2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.65■□□□□ 0.42
Gm11127A7VMS2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm11127A7VMS2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm11127A7VMS2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm11127A7VMS2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm11127A7VMS2 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.64■□□□□ 0.41
Gm11127A7VMS2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm11127A7VMS2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Gm11127A7VMS2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.64■□□□□ 0.41
Gm11127A7VMS2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Gm11127A7VMS2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm11127A7VMS2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm11127A7VMS2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm11127A7VMS2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Gm11127A7VMS2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm11127A7VMS2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm11127A7VMS2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm11127A7VMS2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm11127A7VMS2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm11127A7VMS2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm11127A7VMS2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms