Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Krt28A6BLY7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Krt28A6BLY7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Krt28A6BLY7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.55■■□□□ 1.2
Krt28A6BLY7 Mir5133-201ENSMUST00000174955 77 ntBASIC22.55■■□□□ 1.2
Krt28A6BLY7 Gm22240-201ENSMUST00000175225 82 ntBASIC22.55■■□□□ 1.2
Krt28A6BLY7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC22.55■■□□□ 1.2
Krt28A6BLY7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Krt28A6BLY7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Krt28A6BLY7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Krt28A6BLY7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC22.54■■□□□ 1.2
Krt28A6BLY7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.54■■□□□ 1.2
Krt28A6BLY7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Krt28A6BLY7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Krt28A6BLY7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Krt28A6BLY7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Krt28A6BLY7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Krt28A6BLY7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Krt28A6BLY7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Krt28A6BLY7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Krt28A6BLY7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Krt28A6BLY7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Krt28A6BLY7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Krt28A6BLY7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Krt28A6BLY7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Krt28A6BLY7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Krt28A6BLY7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Krt28A6BLY7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Krt28A6BLY7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Krt28A6BLY7 Gm20760-201ENSMUST00000179197 648 ntBASIC22.52■■□□□ 1.2
Krt28A6BLY7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Krt28A6BLY7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Krt28A6BLY7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Krt28A6BLY7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Krt28A6BLY7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
Krt28A6BLY7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Krt28A6BLY7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
Krt28A6BLY7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Krt28A6BLY7 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.51■■□□□ 1.19
Krt28A6BLY7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Krt28A6BLY7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Krt28A6BLY7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
Krt28A6BLY7 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.5■■□□□ 1.19
Krt28A6BLY7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.5■■□□□ 1.19
Krt28A6BLY7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Krt28A6BLY7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Krt28A6BLY7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.5■■□□□ 1.19
Krt28A6BLY7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
Krt28A6BLY7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.49■■□□□ 1.19
Krt28A6BLY7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC22.49■■□□□ 1.19
Krt28A6BLY7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Krt28A6BLY7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Krt28A6BLY7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Krt28A6BLY7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Krt28A6BLY7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Krt28A6BLY7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Krt28A6BLY7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Krt28A6BLY7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.48■■□□□ 1.19
Krt28A6BLY7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Krt28A6BLY7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Krt28A6BLY7 Gm4968-201ENSMUST00000071458 858 ntBASIC22.48■■□□□ 1.19
Krt28A6BLY7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Krt28A6BLY7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Krt28A6BLY7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Krt28A6BLY7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.47■■□□□ 1.19
Krt28A6BLY7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Krt28A6BLY7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Krt28A6BLY7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Krt28A6BLY7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Krt28A6BLY7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Krt28A6BLY7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Krt28A6BLY7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Krt28A6BLY7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Krt28A6BLY7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Krt28A6BLY7 Gm27801-201ENSMUST00000184174 223 ntBASIC22.46■■□□□ 1.19
Krt28A6BLY7 Gm10252-201ENSMUST00000209541 832 ntBASIC22.46■■□□□ 1.19
Krt28A6BLY7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Krt28A6BLY7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Krt28A6BLY7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Krt28A6BLY7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Krt28A6BLY7 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.45■■□□□ 1.18
Krt28A6BLY7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Krt28A6BLY7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Krt28A6BLY7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Krt28A6BLY7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Krt28A6BLY7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Krt28A6BLY7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Krt28A6BLY7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.44■■□□□ 1.18
Krt28A6BLY7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Krt28A6BLY7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Krt28A6BLY7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Krt28A6BLY7 Gm8520-201ENSMUST00000186517 868 ntBASIC22.44■■□□□ 1.18
Krt28A6BLY7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.44■■□□□ 1.18
Krt28A6BLY7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Krt28A6BLY7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Krt28A6BLY7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Krt28A6BLY7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Krt28A6BLY7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Krt28A6BLY7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Krt28A6BLY7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms