Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.7■□□□□ 0.26
Chd6A3KFM7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.7■□□□□ 0.26
Chd6A3KFM7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.7■□□□□ 0.26
Chd6A3KFM7 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.7■□□□□ 0.26
Chd6A3KFM7 Gm7367-201ENSMUST00000057611 492 ntBASIC16.7■□□□□ 0.26
Chd6A3KFM7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd6A3KFM7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Chd6A3KFM7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd6A3KFM7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd6A3KFM7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Chd6A3KFM7 Gm43530-201ENSMUST00000195920 274 ntBASIC16.69■□□□□ 0.26
Chd6A3KFM7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd6A3KFM7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd6A3KFM7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.69■□□□□ 0.26
Chd6A3KFM7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.69■□□□□ 0.26
Chd6A3KFM7 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.69■□□□□ 0.26
Chd6A3KFM7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.69■□□□□ 0.26
Chd6A3KFM7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.69■□□□□ 0.26
Chd6A3KFM7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chd6A3KFM7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd6A3KFM7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd6A3KFM7 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.68■□□□□ 0.26
Chd6A3KFM7 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.68■□□□□ 0.26
Chd6A3KFM7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd6A3KFM7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.68■□□□□ 0.26
Chd6A3KFM7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd6A3KFM7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Chd6A3KFM7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd6A3KFM7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd6A3KFM7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.68■□□□□ 0.26
Chd6A3KFM7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd6A3KFM7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd6A3KFM7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.67■□□□□ 0.26
Chd6A3KFM7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd6A3KFM7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd6A3KFM7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd6A3KFM7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd6A3KFM7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd6A3KFM7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd6A3KFM7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd6A3KFM7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Chd6A3KFM7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.66■□□□□ 0.26
Chd6A3KFM7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd6A3KFM7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd6A3KFM7 Gm9988-201ENSMUST00000069786 435 ntBASIC16.66■□□□□ 0.26
Chd6A3KFM7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd6A3KFM7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.66■□□□□ 0.26
Chd6A3KFM7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd6A3KFM7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd6A3KFM7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd6A3KFM7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd6A3KFM7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd6A3KFM7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.66■□□□□ 0.26
Chd6A3KFM7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd6A3KFM7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.65■□□□□ 0.26
Chd6A3KFM7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd6A3KFM7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd6A3KFM7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd6A3KFM7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd6A3KFM7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Chd6A3KFM7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Chd6A3KFM7 Gm9987-201ENSMUST00000069768 567 ntBASIC16.64■□□□□ 0.25
Chd6A3KFM7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd6A3KFM7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.64■□□□□ 0.25
Chd6A3KFM7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.64■□□□□ 0.25
Chd6A3KFM7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Chd6A3KFM7 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chd6A3KFM7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd6A3KFM7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd6A3KFM7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chd6A3KFM7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.63■□□□□ 0.25
Chd6A3KFM7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd6A3KFM7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd6A3KFM7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd6A3KFM7 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.62■□□□□ 0.25
Chd6A3KFM7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd6A3KFM7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd6A3KFM7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd6A3KFM7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd6A3KFM7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd6A3KFM7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd6A3KFM7 Gm7290-201ENSMUST00000104990 617 ntBASIC16.62■□□□□ 0.25
Chd6A3KFM7 Gm12918-201ENSMUST00000120234 636 ntBASIC16.62■□□□□ 0.25
Chd6A3KFM7 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.62■□□□□ 0.25
Chd6A3KFM7 Gm15710-201ENSMUST00000121821 636 ntBASIC16.62■□□□□ 0.25
Chd6A3KFM7 Gm5075-201ENSMUST00000196916 622 ntBASIC16.62■□□□□ 0.25
Chd6A3KFM7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd6A3KFM7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.62■□□□□ 0.25
Chd6A3KFM7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.62■□□□□ 0.25
Chd6A3KFM7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.62■□□□□ 0.25
Chd6A3KFM7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Chd6A3KFM7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd6A3KFM7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd6A3KFM7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd6A3KFM7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chd6A3KFM7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.61■□□□□ 0.25
Chd6A3KFM7 Gm6365-201ENSMUST00000054711 744 ntBASIC16.61■□□□□ 0.25
Chd6A3KFM7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd6A3KFM7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Chd6A3KFM7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms