Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav12-1A0N8R1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav12-1A0N8R1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav12-1A0N8R1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav12-1A0N8R1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12-1A0N8R1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12-1A0N8R1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav12-1A0N8R1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12-1A0N8R1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12-1A0N8R1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12-1A0N8R1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav12-1A0N8R1 Gm43566-201ENSMUST00000196851 808 ntBASIC16.82■□□□□ 0.28
Trav12-1A0N8R1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12-1A0N8R1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav12-1A0N8R1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12-1A0N8R1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12-1A0N8R1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12-1A0N8R1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12-1A0N8R1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12-1A0N8R1 Iqck-206ENSMUST00000208658 2891 ntBASIC16.81■□□□□ 0.28
Trav12-1A0N8R1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.81■□□□□ 0.28
Trav12-1A0N8R1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12-1A0N8R1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12-1A0N8R1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.81■□□□□ 0.28
Trav12-1A0N8R1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav12-1A0N8R1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12-1A0N8R1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12-1A0N8R1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12-1A0N8R1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12-1A0N8R1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav12-1A0N8R1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav12-1A0N8R1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav12-1A0N8R1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav12-1A0N8R1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav12-1A0N8R1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav12-1A0N8R1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav12-1A0N8R1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav12-1A0N8R1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav12-1A0N8R1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav12-1A0N8R1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav12-1A0N8R1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Gm13238-201ENSMUST00000117655 780 ntBASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12-1A0N8R1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav12-1A0N8R1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav12-1A0N8R1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav12-1A0N8R1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav12-1A0N8R1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Trav12-1A0N8R1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav12-1A0N8R1 Cap2-205ENSMUST00000225824 1634 ntBASIC16.78■□□□□ 0.28
Trav12-1A0N8R1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav12-1A0N8R1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav12-1A0N8R1 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.77■□□□□ 0.28
Trav12-1A0N8R1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav12-1A0N8R1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.77■□□□□ 0.28
Trav12-1A0N8R1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav12-1A0N8R1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav12-1A0N8R1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav12-1A0N8R1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav12-1A0N8R1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav12-1A0N8R1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Trav12-1A0N8R1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Trav12-1A0N8R1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12-1A0N8R1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12-1A0N8R1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12-1A0N8R1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12-1A0N8R1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12-1A0N8R1 Gm5921-201ENSMUST00000075898 882 ntBASIC16.76■□□□□ 0.27
Trav12-1A0N8R1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12-1A0N8R1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12-1A0N8R1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12-1A0N8R1 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.76■□□□□ 0.27
Trav12-1A0N8R1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav12-1A0N8R1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav12-1A0N8R1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav12-1A0N8R1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav12-1A0N8R1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12-1A0N8R1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12-1A0N8R1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav12-1A0N8R1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12-1A0N8R1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12-1A0N8R1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Trav12-1A0N8R1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12-1A0N8R1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12-1A0N8R1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12-1A0N8R1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12-1A0N8R1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms