Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-2A0A140T8N6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-2A0A140T8N6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-2A0A140T8N6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.97□□□□□ -0.17
Trbv13-2A0A140T8N6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Trbv13-2A0A140T8N6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-2A0A140T8N6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trbv13-2A0A140T8N6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-2A0A140T8N6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-2A0A140T8N6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-2A0A140T8N6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv13-2A0A140T8N6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC13.96□□□□□ -0.17
Trbv13-2A0A140T8N6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv13-2A0A140T8N6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trbv13-2A0A140T8N6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv13-2A0A140T8N6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv13-2A0A140T8N6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv13-2A0A140T8N6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv13-2A0A140T8N6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv13-2A0A140T8N6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-2A0A140T8N6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-2A0A140T8N6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-2A0A140T8N6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
Trbv13-2A0A140T8N6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-2A0A140T8N6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.92□□□□□ -0.18
Trbv13-2A0A140T8N6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv13-2A0A140T8N6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Gm43530-201ENSMUST00000195920 274 ntBASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Hsf1-207ENSMUST00000228371 2102 ntBASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-2A0A140T8N6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms