Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv29A0A0G2LB96 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv29A0A0G2LB96 Iqck-206ENSMUST00000208658 2891 ntBASIC16.71■□□□□ 0.27
Trbv29A0A0G2LB96 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv29A0A0G2LB96 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trbv29A0A0G2LB96 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv29A0A0G2LB96 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv29A0A0G2LB96 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trbv29A0A0G2LB96 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trbv29A0A0G2LB96 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv29A0A0G2LB96 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.7■□□□□ 0.26
Trbv29A0A0G2LB96 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trbv29A0A0G2LB96 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv29A0A0G2LB96 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv29A0A0G2LB96 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv29A0A0G2LB96 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv29A0A0G2LB96 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv29A0A0G2LB96 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.68■□□□□ 0.26
Trbv29A0A0G2LB96 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv29A0A0G2LB96 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv29A0A0G2LB96 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv29A0A0G2LB96 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trbv29A0A0G2LB96 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv29A0A0G2LB96 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv29A0A0G2LB96 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.67■□□□□ 0.26
Trbv29A0A0G2LB96 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv29A0A0G2LB96 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.67■□□□□ 0.26
Trbv29A0A0G2LB96 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Trbv29A0A0G2LB96 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv29A0A0G2LB96 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv29A0A0G2LB96 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trbv29A0A0G2LB96 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv29A0A0G2LB96 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv29A0A0G2LB96 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv29A0A0G2LB96 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.65■□□□□ 0.26
Trbv29A0A0G2LB96 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.65■□□□□ 0.26
Trbv29A0A0G2LB96 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.65■□□□□ 0.26
Trbv29A0A0G2LB96 Gm10399-202ENSMUST00000202768 748 ntBASIC16.65■□□□□ 0.26
Trbv29A0A0G2LB96 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv29A0A0G2LB96 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv29A0A0G2LB96 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv29A0A0G2LB96 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv29A0A0G2LB96 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv29A0A0G2LB96 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv29A0A0G2LB96 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv29A0A0G2LB96 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv29A0A0G2LB96 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv29A0A0G2LB96 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.64■□□□□ 0.25
Trbv29A0A0G2LB96 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Trbv29A0A0G2LB96 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Trbv29A0A0G2LB96 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv29A0A0G2LB96 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.64■□□□□ 0.25
Trbv29A0A0G2LB96 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms